RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 NKX1-1Q15270 411 aaPredicted RBP19.27■□□□□ 0.68
SCARB2-223ENST00000640640 SHC4Q6S5L8 630 aa19.27■□□□□ 0.68
SCARB2-223ENST00000640640 FAM186BQ8IYM0 893 aa19.27■□□□□ 0.68
SCARB2-223ENST00000640640 MICALL1Q8N3F8 863 aa19.27■□□□□ 0.68
SCARB2-223ENST00000640640 SUGCTQ9HAC7 445 aa19.27■□□□□ 0.67
SCARB2-223ENST00000640640 PHLPP2Q6ZVD8 1323 aa19.27■□□□□ 0.67
SCARB2-223ENST00000640640 A6NNZ2 444 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 KRIT1O00522 736 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 GUCY1A2P33402 732 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 EHHADHQ08426 723 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 TUBB8Q3ZCM7 444 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 TCP11X2Q5H9J9 407 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 IGDCC4Q8TDY8 1250 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 PANX2Q96RD6 677 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 SPTLC3Q9NUV7 552 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 HOXA13P31271 388 aaPredicted RBP19.26■□□□□ 0.67
SCARB2-223ENST00000640640 GRM4Q14833 912 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 SULF1Q8IWU6 871 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 CCDC63Q8NA47 563 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 RAB17Q9H0T7 212 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 LRRIQ4A6NIV6 560 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 ZBTB5O15062 677 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 PSMC2P35998 433 aaKnown RBP19.26■□□□□ 0.67
SCARB2-223ENST00000640640 TTLL6Q8N841 843 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 SREK1Q8WXA9 508 aaKnown RBP19.26■□□□□ 0.67
SCARB2-223ENST00000640640 POMGNT1Q8WZA1 660 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 NDST4Q9H3R1 872 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 CLIC2O15247 247 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 GAS8O95995 478 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 ATP5DP30049 168 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 ZBTB8OSQ8IWT0 167 aa19.26■□□□□ 0.67
SCARB2-223ENST00000640640 FEZ2Q9UHY8 353 aaPredicted RBP19.26■□□□□ 0.67
SCARB2-223ENST00000640640 FAM196BA6NMK8 535 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 HNRNPDLO14979 420 aaKnown RBP19.25■□□□□ 0.67
SCARB2-223ENST00000640640 C21orf2O43822 256 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 AFPP02771 609 aaKnown RBP19.25■□□□□ 0.67
SCARB2-223ENST00000640640 POLGP54098 1239 aaPredicted RBP19.25■□□□□ 0.67
SCARB2-223ENST00000640640 LRRC63Q05C16 580 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 ATP6V0A1Q93050 837 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 TDRD3Q9H7E2 651 aaKnown RBP19.25■□□□□ 0.67
SCARB2-223ENST00000640640 CEP128Q6ZU80 1094 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 METTL13Q8N6R0 699 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 GJD4Q96KN9 370 aaPredicted RBP19.25■□□□□ 0.67
SCARB2-223ENST00000640640 VIMP08670 466 aaKnown RBP19.25■□□□□ 0.67
SCARB2-223ENST00000640640 GPSM2P81274 684 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 KRT71Q3SY84 523 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 C12orf60Q5U649 245 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 ARHGAP27Q6ZUM4 889 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 NEDD1Q8NHV4 660 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 UBE2Q2Q8WVN8 375 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 BPIFA3Q9BQP9 254 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 ITSN1Q15811 1721 aa19.25■□□□□ 0.67
SCARB2-223ENST00000640640 POTEMA6NI47 508 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 NDUFA10O95299 355 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 AOC3Q16853 763 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 BHMT2Q9H2M3 363 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 TRPC6Q9Y210 931 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 STAMBPO95630 424 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 GUCY2FP51841 1108 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 C6orf163Q5TEZ5 329 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 CROCCP2Q86T23 111 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 NCAPG2Q86XI2 1143 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 BARHL2Q9NY43 387 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 USP14P54578 494 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 MTMR3Q13615 1198 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 GADL1Q6ZQY3 521 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 PPP2R5EQ16537 467 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 FAM160B2Q86V87 743 aa19.24■□□□□ 0.67
SCARB2-223ENST00000640640 PRPF6O94906 941 aaKnown RBP19.23■□□□□ 0.67
SCARB2-223ENST00000640640 FERP16591 822 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 ANTXR2P58335 489 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 SNAP25P60880 206 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 CCDC170Q8IYT3 715 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 MAIP1Q8WWC4 291 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 FAM204AQ9H8W3 233 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 SPATA31A1Q5TZJ5 1347 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 USP17L15C9J2P7 530 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 USP17L13C9JLJ4 530 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 USP17L11C9JVI0 530 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 USP17L18D6R9N7 530 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 USP17L22D6RA61 530 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 USP17L17D6RBQ6 530 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 USP17L19D6RCP7 530 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 USP17L20D6RJB6 530 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 MFAP3LO75121 409 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 ASNSP08243 561 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 PDE6CP51160 858 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 SNX16P57768 344 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 CYP27A1Q02318 531 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 USP17L24Q0WX57 530 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 AP3B2Q13367 1082 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 USP17L6PQ6QN14 398 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 RTKN2Q8IZC4 609 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 RABEP2Q9H5N1 569 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 PARVGQ9HBI0 331 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 NTSR2O95665 410 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 HOXA7P31268 230 aaPredicted RBP19.23■□□□□ 0.67
SCARB2-223ENST00000640640 MYL7Q01449 175 aa19.23■□□□□ 0.67
SCARB2-223ENST00000640640 UAP1Q16222 522 aaPredicted RBP19.23■□□□□ 0.67
SCARB2-223ENST00000640640 EAPPQ56P03 285 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms