RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 RNF219Q5W0B1 726 aaPredicted RBP10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 RBM46Q8TBY0 533 aaKnown RBP10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 PUS7LQ9H0K6 701 aaKnown RBP10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 MFSD1Q9H3U5 465 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 CPDO75976 1380 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 USP31Q70CQ4 1352 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 PHLPP2Q6ZVD8 1323 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 F8W8V4 182 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 PDIA3P30101 505 aaKnown RBP10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 PGBD3Q8N328 593 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 TBCKQ8TEA7 893 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 ABCB11O95342 1321 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 ASB14A6NK59 587 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 CYP2E1P05181 493 aaPredicted RBP10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 ZNF853P0CG23 659 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 SURF1Q15526 300 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 ADALQ6DHV7 355 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 HAUS1Q96CS2 278 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 TMEM206Q9H813 350 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 RAB20Q9NX57 234 aa10.23□□□□□ -0.77
CACNA1D-230ENST00000640483 VAV2P52735 878 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 CATSPER4Q7RTX7 472 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 AFAP1L2Q8N4X5 818 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 NSUN6Q8TEA1 469 aaKnown RBP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 IFT81Q8WYA0 676 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 PPP1R16BQ96T49 567 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 HERC5Q9UII4 1024 aaKnown RBP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 GMNNO75496 209 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 PTGDRQ13258 359 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 AP3B2Q13367 1082 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 ADAM9Q13443 819 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 CC2D1AQ6P1N0 951 aaPredicted RBP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 GTF3C2Q8WUA4 911 aaPredicted RBP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 SECISBP2LQ93073 1101 aaKnown RBP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 TPCN1Q9ULQ1 816 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 BTBD18B2RXH4 712 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 GTF2F1P35269 517 aaKnown RBP eCLIP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 BPIFB4P59827 614 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 NFX1Q12986 1120 aaKnown RBP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 APOA5Q6Q788 366 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 C4orf50Q6ZRC1 276 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 PGBD1Q96JS3 809 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 SELENOSQ9BQE4 189 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 TRIM7Q9C029 511 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 FOXP1Q9H334 677 aaPredicted RBP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 FAM8A1Q9UBU6 413 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 FAM50BQ9Y247 325 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 ADAMTSL3P82987 1691 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 ATP5DP30049 168 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 PSMC4P43686 418 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 FANCCQ00597 558 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 GOLGA8FQ08AF8 430 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 GOLGA8DPQ0D2H9 430 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 NEDD9Q14511 834 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 STRIP1Q5VSL9 837 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 CASC4Q6P4E1 433 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 LARP4BQ92615 738 aaKnown RBP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 UTYO14607 1347 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 DPEP1P16444 411 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 HOXA13P31271 388 aaPredicted RBP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 FAM173BQ6P4H8 233 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 DSTYKQ6XUX3 929 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 PPM1KQ8N3J5 372 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 RMDN3Q96TC7 470 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 RNF146Q9NTX7 359 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 MAP10Q9P2G4 905 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 G3BP2Q9UN86 482 aaKnown RBP10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 NFE2L3Q9Y4A8 694 aa10.22□□□□□ -0.77
CACNA1D-230ENST00000640483 CYP2D7A0A087X1C5 515 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 MFAP3P55082 362 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 SNAP25P60880 206 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 SARNPP82979 210 aaKnown RBP10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 MYL7Q01449 175 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 PNOCQ13519 176 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 PRR5LQ6MZQ0 368 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 DGKHQ86XP1 1220 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 MAP4K1Q92918 833 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 FAM81BQ96LP2 452 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 ACAD9Q9H845 621 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 UTP11Q9Y3A2 253 aaKnown RBP10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 ZNF18P17022 549 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 RPS12P25398 132 aaKnown RBP10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 PRDX5P30044 214 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 SLC12A2P55011 1212 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 RCSD1Q6JBY9 416 aa10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 MARCH10Q8NA82 808 aaPredicted RBP10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 RPF1Q9H9Y2 349 aaKnown RBP10.21□□□□□ -0.77
CACNA1D-230ENST00000640483 LMNB1P20700 586 aa10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 MCAMP43121 646 aa10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 ZBTB16Q05516 673 aa10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 LINC00116Q8NCU8 138 aa10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 U2AF1L4Q8WU68 220 aaKnown RBP10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 ATRIPQ8WXE1 791 aa10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 NT5C1BQ96P26 610 aa10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 SMC6Q96SB8 1091 aa10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 FAM207AQ9NSI2 230 aaPredicted RBP10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 A6NJR5 290 aa10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 SMIM23A6NLE4 172 aa10.21□□□□□ -0.78
CACNA1D-230ENST00000640483 CELF2O95319 508 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms