RNA–Protein interactions for RNA: ENST00000640376.1

RTTN-216, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-216ENST00000640376 GPATCH4Q5T3I0 446 aaKnown RBP9.98□□□□□ -0.81
RTTN-216ENST00000640376 APOBEC3HQ6NTF7 200 aaKnown RBP9.98□□□□□ -0.81
RTTN-216ENST00000640376 NOA1Q8NC60 698 aaKnown RBP9.98□□□□□ -0.81
RTTN-216ENST00000640376 HAS1Q92839 578 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 FUT8Q9BYC5 575 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 PSTPIP2Q9H939 334 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 ATP8B1O43520 1251 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 KIF20AO95235 890 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 PLEKP08567 350 aaPredicted RBP9.98□□□□□ -0.81
RTTN-216ENST00000640376 OAS2P29728 719 aaKnown RBP9.98□□□□□ -0.81
RTTN-216ENST00000640376 CRKP46108 304 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 PDIA5Q14554 519 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 BRD3Q15059 726 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 VWA3BQ502W6 1294 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 PPP4R3AQ6IN85 833 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 GUF1Q8N442 669 aaKnown RBP9.98□□□□□ -0.81
RTTN-216ENST00000640376 MSANTD4Q8NCY6 345 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 ZBTB9Q96C00 473 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 LACRTQ9GZZ8 138 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 KCNQ5Q9NR82 932 aa9.98□□□□□ -0.81
RTTN-216ENST00000640376 USP17L15C9J2P7 530 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 USP17L13C9JLJ4 530 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 USP17L11C9JVI0 530 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 USP17L18D6R9N7 530 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 USP17L22D6RA61 530 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 USP17L17D6RBQ6 530 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 USP17L19D6RCP7 530 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 USP17L20D6RJB6 530 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 PSMD14O00487 310 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 KRT86O43790 486 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 NPR1P16066 1061 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 MRPL12P52815 198 aaKnown RBP9.97□□□□□ -0.81
RTTN-216ENST00000640376 USP17L24Q0WX57 530 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 COASYQ13057 564 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 USP17L6PQ6QN14 398 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 TRAPPC11Q7Z392 1133 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 KIAA0825Q8IV33 1275 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 NDST4Q9H3R1 872 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 MYH10P35580 1976 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 ZNF646O15015 1829 aaPredicted RBP9.97□□□□□ -0.81
RTTN-216ENST00000640376 MACROD2A1Z1Q3 448 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 POTEB2H3BUK9 544 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 SRGAP2O75044 1071 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 MAN2A1Q16706 1144 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 QRICH1Q2TAL8 776 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 HHIPL2Q6UWX4 724 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 CAPZA3Q96KX2 299 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 TBC1D7Q9P0N9 293 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 A0A1W2PQJ5 194 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 EIF3CLB5ME19 914 aaKnown RBP9.97□□□□□ -0.81
RTTN-216ENST00000640376 RBM5P52756 815 aaKnown RBP eCLIP9.97□□□□□ -0.81
RTTN-216ENST00000640376 VSNL1P62760 191 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 LRRC63Q05C16 580 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 SMC1AQ14683 1233 aaKnown RBP9.97□□□□□ -0.81
RTTN-216ENST00000640376 LRRC55Q6ZSA7 311 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 KRT27Q7Z3Y8 459 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 KRT26Q7Z3Y9 468 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 C2CD5Q86YS7 1000 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 CCDC170Q8IYT3 715 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 PROM2Q8N271 834 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 EIF3CQ99613 913 aaKnown RBP9.97□□□□□ -0.81
RTTN-216ENST00000640376 MMRN2Q9H8L6 949 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 PCDHA12Q9UN75 941 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 SIK3Q9Y2K2 1263 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 DUSP10Q9Y6W6 482 aa9.97□□□□□ -0.81
RTTN-216ENST00000640376 ERICH4A6NGS2 130 aa9.96□□□□□ -0.81
RTTN-216ENST00000640376 EEF2P13639 858 aaKnown RBP9.96□□□□□ -0.81
RTTN-216ENST00000640376 SLC1A4P43007 532 aa9.96□□□□□ -0.81
RTTN-216ENST00000640376 CACNB1Q02641 598 aaPredicted RBP9.96□□□□□ -0.81
RTTN-216ENST00000640376 FIGNQ5HY92 759 aa9.96□□□□□ -0.81
RTTN-216ENST00000640376 EHBP1Q8NDI1 1231 aa9.96□□□□□ -0.81
RTTN-216ENST00000640376 TSG101Q99816 390 aa9.96□□□□□ -0.81
RTTN-216ENST00000640376 FGFBP2Q9BYJ0 223 aa9.96□□□□□ -0.81
RTTN-216ENST00000640376 TANGO6Q9C0B7 1094 aa9.96□□□□□ -0.81
RTTN-216ENST00000640376 QTRT2Q9H974 415 aaKnown RBP9.96□□□□□ -0.81
RTTN-216ENST00000640376 SUGCTQ9HAC7 445 aa9.96□□□□□ -0.81
RTTN-216ENST00000640376 RAB21Q9UL25 225 aa9.96□□□□□ -0.81
RTTN-216ENST00000640376 POTEB3A0JP26 581 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 DDTLA6NHG4 134 aaPredicted RBP9.96□□□□□ -0.82
RTTN-216ENST00000640376 POTECB2RU33 542 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 E9PMD0 336 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 GCFC2P16383 781 aaKnown RBP9.96□□□□□ -0.82
RTTN-216ENST00000640376 EHHADHQ08426 723 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 RAD51AP2Q09MP3 1159 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 CDC37Q16543 378 aaPredicted RBP9.96□□□□□ -0.82
RTTN-216ENST00000640376 POTEBQ6S5H4 581 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 MYOCDQ8IZQ8 938 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 MTMR8Q96EF0 704 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 CCDC42Q96M95 316 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 TMX4Q9H1E5 349 aaPredicted RBP9.96□□□□□ -0.82
RTTN-216ENST00000640376 PCDHA1Q9Y5I3 950 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 SAR1BQ9Y6B6 198 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 SLX4Q8IY92 1834 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 KDM3AQ9Y4C1 1321 aa9.96□□□□□ -0.82
RTTN-216ENST00000640376 ZNF263O14978 683 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 ERLIN1O75477 346 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 FGFR1OPO95684 399 aaKnown RBP9.95□□□□□ -0.82
RTTN-216ENST00000640376 HSPA1LP34931 641 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 SNAP25P60880 206 aa9.95□□□□□ -0.82
RTTN-216ENST00000640376 SPA17Q15506 151 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms