RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TXKP42681 527 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 COPB1P53618 953 aaKnown RBP16.9■□□□□ 0.3
TRIM3-215ENST00000639856 HIRAP54198 1017 aaPredicted RBP16.9■□□□□ 0.3
TRIM3-215ENST00000639856 STIM1Q13586 685 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 KCNJ12Q14500 433 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 CALCRLQ16602 461 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 PDCL2Q8N4E4 241 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 ERO1AQ96HE7 468 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 MMTAG2Q9BU76 263 aaKnown RBP16.9■□□□□ 0.3
TRIM3-215ENST00000639856 NAA15Q9BXJ9 866 aaKnown RBP16.9■□□□□ 0.3
TRIM3-215ENST00000639856 TRIM9Q9C026 710 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 SH2D4AQ9H788 454 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 CCDC174Q6PII3 467 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 GJA10Q969M2 543 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 C7orf25Q9BPX7 421 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 ANO3Q9BYT9 981 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 GGA3Q9NZ52 723 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 DNAI1Q9UI46 699 aa16.9■□□□□ 0.3
TRIM3-215ENST00000639856 POLR2AP24928 1970 aaKnown RBP16.9■□□□□ 0.3
TRIM3-215ENST00000639856 PSMA7O14818 248 aa16.89■□□□□ 0.29
TRIM3-215ENST00000639856 MFAP3LO75121 409 aa16.89■□□□□ 0.29
TRIM3-215ENST00000639856 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRIM3-215ENST00000639856 NAA30Q147X3 362 aaPredicted RBP16.89■□□□□ 0.29
TRIM3-215ENST00000639856 TOGARAM2Q6ZUX3 1019 aa16.89■□□□□ 0.29
TRIM3-215ENST00000639856 CALML4Q96GE6 196 aa16.89■□□□□ 0.29
TRIM3-215ENST00000639856 SYT17Q9BSW7 474 aa16.89■□□□□ 0.29
TRIM3-215ENST00000639856 VPS16Q9H269 839 aa16.89■□□□□ 0.29
TRIM3-215ENST00000639856 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRIM3-215ENST00000639856 TRIM49BA6NDI0 452 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 CTNND1O60716 968 aaKnown RBP16.88■□□□□ 0.29
TRIM3-215ENST00000639856 GYPCP04921 128 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 YBX3P16989 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
TRIM3-215ENST00000639856 HOXA13P31271 388 aaPredicted RBP16.88■□□□□ 0.29
TRIM3-215ENST00000639856 AMPD3Q01432 767 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 IRF2BP1Q8IU81 584 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 CNGA4Q8IV77 575 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 CPLX3Q8WVH0 158 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 CCDC47Q96A33 483 aaKnown RBP16.88■□□□□ 0.29
TRIM3-215ENST00000639856 UIMC1Q96RL1 719 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 GLT8D2Q9H1C3 349 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 TAB2Q9NYJ8 693 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 DDX25Q9UHL0 483 aaKnown RBP16.88■□□□□ 0.29
TRIM3-215ENST00000639856 DOCK1Q14185 1865 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
TRIM3-215ENST00000639856 CASP14P31944 242 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 PMS1P54277 932 aaKnown RBP16.88■□□□□ 0.29
TRIM3-215ENST00000639856 PPP4R3AQ6IN85 833 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 CCDC51Q96ER9 411 aa16.88■□□□□ 0.29
TRIM3-215ENST00000639856 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
TRIM3-215ENST00000639856 TPM1P09493 284 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 TMEM266Q2M3C6 531 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 APOBEC3FQ8IUX4 373 aaKnown RBP16.87■□□□□ 0.29
TRIM3-215ENST00000639856 CHURC1Q8WUH1 139 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 DHTKD1Q96HY7 919 aaPredicted RBP16.87■□□□□ 0.29
TRIM3-215ENST00000639856 GTPBP4Q9BZE4 634 aaKnown RBP16.87■□□□□ 0.29
TRIM3-215ENST00000639856 RAB34Q9BZG1 259 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 THAP9Q9H5L6 903 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 EXOC1Q9NV70 894 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 LRWD1Q9UFC0 647 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 POTEMA6NI47 508 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 FECHP22830 423 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 EEF1GP26641 437 aaKnown RBP16.87■□□□□ 0.29
TRIM3-215ENST00000639856 FXR1P51114 621 aaKnown RBP eCLIP16.87■□□□□ 0.29
TRIM3-215ENST00000639856 PDE4DQ08499 809 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 PDIA5Q14554 519 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 TTI2Q6NXR4 508 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 HAS1Q92839 578 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 ZKSCAN4Q969J2 545 aaPredicted RBP16.87■□□□□ 0.29
TRIM3-215ENST00000639856 RNF181Q9P0P0 153 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 STK17AQ9UEE5 414 aa16.87■□□□□ 0.29
TRIM3-215ENST00000639856 SOWAHDA6NJG2 315 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 PPP1R2P41236 205 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 ASIC1P78348 528 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 GRB10Q13322 594 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 AP3B2Q13367 1082 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 TRIM14Q14142 442 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 MTF1Q14872 753 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 CREBRFQ8IUR6 639 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 CRYGNQ8WXF5 182 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 TBC1D5Q92609 795 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 TRIM47Q96LD4 638 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 CCDC94Q9BW85 323 aaPredicted RBP16.86■□□□□ 0.29
TRIM3-215ENST00000639856 FEM1BQ9UK73 627 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 SSC5DA1L4H1 1573 aa16.86■□□□□ 0.29
TRIM3-215ENST00000639856 FANCGO15287 622 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 PLA2G6O60733 806 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 CCDC175P0C221 793 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 ARHGAP4P98171 946 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 MTMR2Q13614 643 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 DLK2Q6UY11 383 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 FAM160B2Q86V87 743 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 NOC3LQ8WTT2 800 aaKnown RBP16.85■□□□□ 0.29
TRIM3-215ENST00000639856 WRNIP1Q96S55 665 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 DESI2Q9BSY9 194 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 SRRTQ9BXP5 876 aaKnown RBP16.85■□□□□ 0.29
TRIM3-215ENST00000639856 KIAA1683Q9H0B3 1180 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 GCFC2P16383 781 aaKnown RBP16.85■□□□□ 0.29
TRIM3-215ENST00000639856 UBXN1Q04323 297 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 DCAF15Q66K64 600 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 RAD9BQ6WBX8 426 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms