RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 NONOQ15233 471 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 TBC1D25Q3MII6 688 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 LONRF3Q496Y0 759 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 WLSQ5T9L3 541 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 RESP18Q5W5W9 173 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 STOX1Q6ZVD7 989 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 CCDC84Q86UT8 332 aaPredicted RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 LONP2Q86WA8 852 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 CSGALNACT2Q8N6G5 542 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 OR8K1Q8NGG5 319 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 SNRNP27Q8WVK2 155 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 MAIP1Q8WWC4 291 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 NELFBQ8WX92 580 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 BORCS6Q96GS4 357 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 RBM41Q96IZ5 413 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 PLEKHG4BQ96PX9 1271 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 TRIM7Q9C029 511 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 ZSWIM5Q9P217 1185 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 C15orf41Q9Y2V0 281 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 L3MBTL1Q9Y468 752 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 NBPF26B4DH59 902 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 FLOT1O75955 427 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 LONP1P36776 959 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 MCAMP43121 646 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 PDE4DQ08499 809 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 CETN1Q12798 172 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 MPP3Q13368 585 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 SLC5A9Q2M3M2 681 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 ACCSLQ4AC99 568 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 FAM133BQ5BKY9 247 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 NBPF14Q5TI25 921 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 TRIM65Q6PJ69 517 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 TMEM110Q86TL2 294 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 SGMS1Q86VZ5 419 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 RBM12BQ8IXT5 1001 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 NBPF15Q8N660 670 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 PPFIBP2Q8ND30 876 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 DDX12PQ92771 950 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 HAUS1Q96CS2 278 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 EPN3Q9H201 632 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 ATP8A2Q9NTI2 1148 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 HDAC6Q9UBN7 1215 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 CORO1CQ9ULV4 474 aaPredicted RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 SAR1BQ9Y6B6 198 aa6.22□□□□□ -1.41
SCARB2-218ENST00000639715 BZW2Q9Y6E2 419 aaKnown RBP6.22□□□□□ -1.41
SCARB2-218ENST00000639715 TNS3Q68CZ2 1445 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 PTPREP23469 700 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 CHRNDQ07001 517 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 SLC44A4Q53GD3 710 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 GRAMD4Q6IC98 578 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 NCAPG2Q86XI2 1143 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 BLIDQ8IZY5 108 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 KAZALD1Q96I82 304 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 NOC4LQ9BVI4 516 aaKnown RBP6.21□□□□□ -1.41
SCARB2-218ENST00000639715 NSRP1Q9H0G5 558 aaKnown RBP6.21□□□□□ -1.41
SCARB2-218ENST00000639715 GOLPH3LQ9H4A5 285 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 ANKZF1Q9H8Y5 726 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 MAGEF1Q9HAY2 307 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 ZBTB1Q9Y2K1 713 aa6.21□□□□□ -1.41
SCARB2-218ENST00000639715 PRPF3O43395 683 aaKnown RBP6.21□□□□□ -1.42
SCARB2-218ENST00000639715 PPP1R37O75864 691 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 FESP07332 822 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 ATP1A3P13637 1013 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 ATP4AP20648 1035 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 LSP1P33241 339 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 DNM2P50570 870 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 SH3BGRP55822 239 aaPredicted RBP6.21□□□□□ -1.42
SCARB2-218ENST00000639715 PI16Q6UXB8 463 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 RBM43Q6ZSC3 357 aaKnown RBP6.21□□□□□ -1.42
SCARB2-218ENST00000639715 TOGARAM2Q6ZUX3 1019 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 SH2D3CQ8N5H7 860 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 CCDC197Q8NCU1 140 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 KLHL29Q96CT2 875 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 OPTNQ96CV9 577 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 ZNF512BQ96KM6 892 aaPredicted RBP6.21□□□□□ -1.42
SCARB2-218ENST00000639715 TSPAN18Q96SJ8 248 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 SLC39A2Q9NP94 309 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 PIH1D3Q9NQM4 214 aaKnown RBP6.21□□□□□ -1.42
SCARB2-218ENST00000639715 GPHNQ9NQX3 736 aaPredicted RBP6.21□□□□□ -1.42
SCARB2-218ENST00000639715 TMOD4Q9NZQ9 345 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 C2CD2Q9Y426 696 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 C1orf167Q5SNV9 1468 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 LGR5O75473 907 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 SUPT3HO75486 399 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 FAM200BP0CF97 657 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 GCLCP48506 637 aaPredicted RBP6.21□□□□□ -1.42
SCARB2-218ENST00000639715 TFAP4Q01664 338 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 LETM2Q2VYF4 491 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 MIS18BP1Q6P0N0 1132 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 PIGBQ92521 554 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 SELENOSQ9BQE4 189 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 CSRNP2Q9H175 543 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 HAUS4Q9H6D7 363 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 DNAAF2Q9NVR5 837 aaKnown RBP6.21□□□□□ -1.42
SCARB2-218ENST00000639715 GALNT8Q9NY28 637 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 TAB2Q9NYJ8 693 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 MAN1B1Q9UKM7 699 aa6.21□□□□□ -1.42
SCARB2-218ENST00000639715 GCOM1H8Y6P7 765 aaPredicted RBP6.2□□□□□ -1.42
SCARB2-218ENST00000639715 LAD1O00515 517 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms