RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 IFNAR2P48551 515 aa17.7■□□□□ 0.42
CACNA1A-258ENST00000638029 TNNI3KQ59H18 835 aa17.7■□□□□ 0.42
CACNA1A-258ENST00000638029 PHLDB3Q6NSJ2 640 aa17.7■□□□□ 0.42
CACNA1A-258ENST00000638029 GEMIN8Q9NWZ8 242 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-258ENST00000638029 KIF17Q9P2E2 1029 aa17.7■□□□□ 0.42
CACNA1A-258ENST00000638029 FPGT-TNNI3KV9GXZ4 949 aa17.7■□□□□ 0.42
CACNA1A-258ENST00000638029 PLEKHM2Q8IWE5 1019 aa17.7■□□□□ 0.42
CACNA1A-258ENST00000638029 NLRP4Q96MN2 994 aa17.7■□□□□ 0.42
CACNA1A-258ENST00000638029 LRRC8CQ8TDW0 803 aa17.7■□□□□ 0.42
CACNA1A-258ENST00000638029 C19orf44Q9H6X5 657 aa17.7■□□□□ 0.42
CACNA1A-258ENST00000638029 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 SH3TC1Q8TE82 1336 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 AGRPO00253 132 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 NONOQ15233 471 aaKnown RBP eCLIP17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 ARMCX5Q6P1M9 558 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 HIPK4Q8NE63 616 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 PANK4Q9NVE7 773 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 ATP2B4P23634 1241 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 BFSP1Q12934 665 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 ZNF790Q6PG37 636 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 TRIM67Q6ZTA4 783 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 RETREG2Q8NC44 543 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 DDHD2O94830 711 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 TFAMQ00059 246 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 ANKRD20A4Q4UJ75 823 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 ANKRD20A8PQ5CZ79 823 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 ANKRD20A2Q5SQ80 823 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 ANKRD20A1Q5TYW2 823 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 CHURC1Q8WUH1 139 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 METTL22Q9BUU2 404 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 EIF2AQ9BY44 585 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 NXF1Q9UBU9 619 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 POLR2MP0CAP2 368 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 TUBB2AQ13885 445 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 NKX1-1Q15270 411 aaPredicted RBP17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 MFSD4BQ5TF39 518 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 SCARA5Q6ZMJ2 495 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 MIGA2Q7L4E1 593 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 TEX2Q8IWB9 1127 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 TUBB2BQ9BVA1 445 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 RAB17Q9H0T7 212 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 ATF2P15336 505 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 ANGPT1Q15389 498 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 DSTYKQ6XUX3 929 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 KRT25Q7Z3Z0 450 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 STRIP2Q9ULQ0 834 aa17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 IFIH1Q9BYX4 1025 aaKnown RBP17.69■□□□□ 0.42
CACNA1A-258ENST00000638029 SCN4BQ8IWT1 228 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 SLC10A4Q96EP9 437 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 CYTH2Q99418 400 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 KDM3AQ9Y4C1 1321 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 ZKSCAN8Q15776 578 aaPredicted RBP17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 DEPDC1BQ8WUY9 529 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 SYCP2Q9BX26 1530 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 TSC22D1Q15714 1073 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 MKL2Q9ULH7 1088 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 GNA14O95837 355 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 MAGEA1P43355 309 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 GNGT1P63211 74 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 TJAP1Q5JTD0 557 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 REXO1Q8N1G1 1221 aaKnown RBP17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 FAM49AQ9H0Q0 323 aaPredicted RBP17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 CYP4A11Q02928 519 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 PSTPIP2Q9H939 334 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 TFAP4Q01664 338 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 GSDMAQ96QA5 445 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 LRRC4Q9HBW1 653 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 DDX25Q9UHL0 483 aaKnown RBP17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 KCNG1Q9UIX4 513 aa17.68■□□□□ 0.42
CACNA1A-258ENST00000638029 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 XRCC5P13010 732 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 PAK2Q13177 524 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 ZNF507Q8TCN5 953 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 MAIP1Q8WWC4 291 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 DENND3A2RUS2 1198 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 GOLGA8HP0CJ92 632 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 BCAMP50895 628 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 KRT24Q2M2I5 525 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 CFAP69A5D8W1 941 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 SYCE1LA8MT33 242 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 NBNO60934 754 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 SLC8A1P32418 973 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 FANCCQ00597 558 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 PBXIP1Q96AQ6 731 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 HMGB1P1B2RPK0 211 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 CROCCP2Q86T23 111 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 GOLGA8SH3BPF8 625 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 OCRLQ01968 901 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 FBXW10Q5XX13 1052 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 KCTD6Q8NC69 237 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 USP6NLQ92738 828 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 THOC1Q96FV9 657 aaKnown RBP17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 RAD17O75943 681 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 FAM178BQ8IXR5 827 aa17.67■□□□□ 0.42
CACNA1A-258ENST00000638029 SPATA5Q8NB90 893 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms