RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 SEPT14Q6ZU15 432 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 ZNF365Q70YC5 407 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 EIF1ADQ8N9N8 165 aaKnown RBP8.67□□□□□ -1.02
CDKL5-211ENST00000637881 ATP11CQ8NB49 1132 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 TSEN2Q8NCE0 465 aaKnown RBP8.67□□□□□ -1.02
CDKL5-211ENST00000637881 LINC00301Q8NCQ3 95 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 NSUN7Q8NE18 718 aaKnown RBP8.67□□□□□ -1.02
CDKL5-211ENST00000637881 STKLD1Q8NE28 680 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 SH3TC2Q8TF17 1288 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 XAGE3Q8WTP9 111 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 KCNN1Q92952 543 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 FBXW7Q969H0 707 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 CTAGE1Q96RT6 745 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 TIPINQ9BVW5 301 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 ZBTB3Q9H5J0 574 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 CNOT10Q9H9A5 744 aaKnown RBP8.67□□□□□ -1.02
CDKL5-211ENST00000637881 SLC12A6Q9UHW9 1150 aa8.67□□□□□ -1.02
CDKL5-211ENST00000637881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 SPDYE5A6NIY4 337 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 ORC4O43929 436 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 EVI5O60447 810 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 CLTAP09496 248 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 HOXB7P09629 217 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 PRLRP16471 622 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 RFC4P35249 363 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 PTH1RQ03431 593 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 R3HDM1Q15032 1099 aaKnown RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 STK38Q15208 465 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 SLC4A10Q6U841 1118 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 TRIML1Q8N9V2 468 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 HELBQ8NG08 1087 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 CAGE1Q8TC20 777 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 FBF1Q8TES7 1133 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 RRP36Q96EU6 259 aaKnown RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 C8orf76Q96K31 380 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 IFT74Q96LB3 600 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 NAP1L3Q99457 506 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 CORO1BQ9BR76 489 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 MIS12Q9H081 205 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 TSPYL2Q9H2G4 693 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 TMBIM4Q9HC24 238 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 PREBQ9HCU5 417 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 DDX21Q9NR30 783 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 ATP8A2Q9NTI2 1148 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 ZNHIT6Q9NWK9 470 aaKnown RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 CTTNBP2NLQ9P2B4 639 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 MAPK8IP1Q9UQF2 711 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 KDM3BQ7LBC6 1761 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 ZNF233A6NK53 670 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 F6X3S4 739 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 SMAPO00193 183 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 RPS6KA4O75676 772 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 DRD4P21917 467 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 STAT6P42226 847 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 MRPS25P82663 173 aaKnown RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 SLC15A2Q16348 729 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 RC3H1Q5TC82 1133 aaKnown RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 SPTY2D1Q68D10 685 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 OR52E8Q6IFG1 317 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 GIGYF2Q6Y7W6 1299 aaKnown RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 RUFY4Q6ZNE9 571 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 RIC3Q7Z5B4 369 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 SLF2Q8IX21 1173 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 IQCF2Q8IXL9 164 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 GSPT2Q8IYD1 628 aaKnown RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 SH2D3CQ8N5H7 860 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 WHAMMQ8TF30 809 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 FAM167BQ9BTA0 163 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 STIM2Q9P246 746 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 PDP2Q9P2J9 529 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 SRP68Q9UHB9 627 aaKnown RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 SCOCQ9UIL1 159 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 SSUH2Q9Y2M2 353 aa8.66□□□□□ -1.02
CDKL5-211ENST00000637881 CTDP1Q9Y5B0 961 aaPredicted RBP8.66□□□□□ -1.02
CDKL5-211ENST00000637881 WDR46O15213 610 aaKnown RBP8.65□□□□□ -1.02
CDKL5-211ENST00000637881 SPTLC2O15270 562 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 JAK2O60674 1132 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 HIP1RO75146 1068 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 ZPR1O75312 459 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 TROVE2P10155 538 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDKL5-211ENST00000637881 VDRP11473 427 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 PFKFB1P16118 471 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 IL6STP40189 918 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-211ENST00000637881 TRPC1P48995 793 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 POLE2P56282 527 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 CEBPZQ03701 1054 aaKnown RBP8.65□□□□□ -1.02
CDKL5-211ENST00000637881 FLIIQ13045 1269 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 KIF6Q6ZMV9 814 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 NCCRP1Q6ZVX7 275 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-211ENST00000637881 PNMA8AQ86V59 439 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-211ENST00000637881 CCDC65Q8IXS2 484 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 IFT20Q8IY31 132 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 PTPRN2Q92932 1015 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 BHMTQ93088 406 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 MAML3Q96JK9 1138 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 SLF1Q9BQI6 1058 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 PDGFDQ9GZP0 370 aaPredicted RBP8.65□□□□□ -1.02
CDKL5-211ENST00000637881 BHMT2Q9H2M3 363 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 NRDE2Q9H7Z3 1164 aa8.65□□□□□ -1.02
CDKL5-211ENST00000637881 PIDD1Q9HB75 910 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms