RNA–Protein interactions for RNA: ENST00000636903.1

SMARCA2-254, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-254ENST00000636903 SNRNP48Q6IEG0 339 aaKnown RBP15.37■□□□□ 0.05
SMARCA2-254ENST00000636903 USP50Q70EL3 339 aaPredicted RBP15.37■□□□□ 0.05
SMARCA2-254ENST00000636903 TRERF1Q96PN7 1200 aa15.37■□□□□ 0.05
SMARCA2-254ENST00000636903 NAT10Q9H0A0 1025 aaKnown RBP15.37■□□□□ 0.05
SMARCA2-254ENST00000636903 PIK3CDO00329 1044 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 EIF2AK2P19525 551 aaKnown RBP15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 CYP4A11Q02928 519 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 RAD51AP2Q09MP3 1159 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 NT5DC1Q5TFE4 455 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 GADL1Q6ZQY3 521 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 EEF2KMTQ96G04 330 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 TAAR1Q96RJ0 339 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 GLT8D2Q9H1C3 349 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 BLOC1S4Q9NUP1 217 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 RLFQ13129 1914 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 IGLV3-22A0A075B6J6 115 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 POTEB3A0JP26 581 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 ARP10275 920 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 FXR2P51116 673 aaKnown RBP eCLIP15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 TMEM266Q2M3C6 531 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 NCAPH2Q6IBW4 605 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 POTEBQ6S5H4 581 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 DYMQ7RTS9 669 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 ELOA2Q8IYF1 753 aaPredicted RBP15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 FANCLQ9NW38 375 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 TMOD4Q9NZQ9 345 aa15.36■□□□□ 0.05
SMARCA2-254ENST00000636903 DDX39AO00148 427 aaKnown RBP15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 EML1O00423 815 aa15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 PTMAP06454 111 aaKnown RBP15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 KANK3Q6NY19 840 aa15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 CATSPERGQ6ZRH7 1159 aa15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 ZSCAN30Q86W11 494 aa15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 SPDYE16A6NNV3 312 aaPredicted RBP15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 E9PMD0 336 aa15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 ZBED4O75132 1171 aa15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 MED24O75448 989 aa15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 FOSP01100 380 aaPredicted RBP15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 SSBP05455 408 aaKnown RBP eCLIP15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 NOL9Q5SY16 702 aaKnown RBP15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 TRMT1LQ7Z2T5 733 aaKnown RBP15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 RRAGCQ9HB90 399 aa15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 CCDC39Q9UFE4 941 aa15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 ZNF214Q9UL59 606 aaPredicted RBP15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 DNAH12Q6ZR08 3092 aa15.35■□□□□ 0.05
SMARCA2-254ENST00000636903 CYP3A7-CYP3A51PA0A087WV96 503 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 POTEFA5A3E0 1075 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 RPN1P04843 607 aaKnown RBP15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 GCFC2P16383 781 aaKnown RBP15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 CYP3A7P24462 503 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 DSG3P32926 999 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 CCT6AP40227 531 aaKnown RBP15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 IREB2P48200 963 aaKnown RBP15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 PSMC6P62333 389 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 SPIRE1Q08AE8 756 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 COG2Q14746 738 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 POTEGQ6S5H5 508 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 REPS2Q8NFH8 660 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 SYTL5Q8TDW5 730 aaPredicted RBP15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 CCDC34Q96HJ3 373 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 AK8Q96MA6 479 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 WDR11Q9BZH6 1224 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 RNF146Q9NTX7 359 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 KBTBD4Q9NVX7 518 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 RGL1Q9NZL6 768 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 KIAA1024Q9UPX6 916 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 ZBTB39O15060 712 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 GRIN3BO60391 1043 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 SMC2O95347 1197 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 MYCLP12524 364 aaPredicted RBP15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 ITGB5P18084 799 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 BAATQ14032 418 aaPredicted RBP15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 KRT79Q5XKE5 535 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 CDK5RAP3Q96JB5 506 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 MBOAT7Q96N66 472 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 GINM1Q9NU53 330 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 PARP14Q460N5 1801 aa15.34■□□□□ 0.05
SMARCA2-254ENST00000636903 NPHP3-ACAD11A0A0J9YXS1 232 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 C19orf81C9J6K1 198 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 GTPBP6O43824 516 aaPredicted RBP15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 SORBS3O60504 671 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 FCER1AP12319 257 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 GJA5P36382 358 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 HSD17B4P51659 736 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 ZNF75DP51815 510 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 KMT5BQ4FZB7 885 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 PLA2G4DQ86XP0 818 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 OPTNQ96CV9 577 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 CALML4Q96GE6 196 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 BCAS3Q9H6U6 928 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 SAMSN1Q9NSI8 373 aaKnown RBP15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 MYMKA6NI61 221 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 KLRC4O43908 158 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 ORC2Q13416 577 aaPredicted RBP15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 PAGR1Q9BTK6 254 aa15.33■□□□□ 0.04
SMARCA2-254ENST00000636903 PTPRFP10586 1907 aa15.32■□□□□ 0.04
SMARCA2-254ENST00000636903 CEP350Q5VT06 3117 aa15.32■□□□□ 0.04
SMARCA2-254ENST00000636903 PPP1R3GB7ZBB8 358 aa15.32■□□□□ 0.04
SMARCA2-254ENST00000636903 ASIC1P78348 528 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms