RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 SYTL5Q8TDW5 730 aaPredicted RBP6.07□□□□□ -1.44
CLN5-212ENST00000636602 NINJ1Q92982 152 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 MFSD3Q96ES6 412 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 RBM15Q96T37 977 aaKnown RBP eCLIP6.07□□□□□ -1.44
CLN5-212ENST00000636602 DHRS4Q9BTZ2 278 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 C1QTNF3Q9BXJ4 246 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 SLITRK6Q9H5Y7 841 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 WHRNQ9P202 907 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 DUSP10Q9Y6W6 482 aa6.07□□□□□ -1.44
CLN5-212ENST00000636602 A0A1B0GTL3 188 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 NUDT19A8MXV4 375 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 NOP56O00567 594 aaKnown RBP6.06□□□□□ -1.44
CLN5-212ENST00000636602 PRODHO43272 600 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 TBX1O43435 398 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 RAPGEF3O95398 923 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 VIL1P09327 827 aaKnown RBP6.06□□□□□ -1.44
CLN5-212ENST00000636602 MYCLP1P12525 358 aaPredicted RBP6.06□□□□□ -1.44
CLN5-212ENST00000636602 ITGA4P13612 1032 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 C6P13671 934 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 CD247P20963 164 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 CNR2P34972 360 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 GDF5P43026 501 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 LAPTM5Q13571 262 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 TM4SF20Q53R12 229 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 ANKRD39Q53RE8 183 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 GALNT18Q6P9A2 607 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 SCUBE1Q8IWY4 988 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 RPUSD2Q8IZ73 545 aaKnown RBP6.06□□□□□ -1.44
CLN5-212ENST00000636602 BVESQ8NE79 360 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 KISS1RQ969F8 398 aaPredicted RBP6.06□□□□□ -1.44
CLN5-212ENST00000636602 HDAC8Q9BY41 377 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 NCOA5Q9HCD5 579 aaKnown RBP6.06□□□□□ -1.44
CLN5-212ENST00000636602 GP6Q9HCN6 339 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 FBXL21Q9UKT6 434 aa6.06□□□□□ -1.44
CLN5-212ENST00000636602 PLD2O14939 933 aa6.05□□□□□ -1.44
CLN5-212ENST00000636602 PABPC1P11940 636 aaKnown RBP6.05□□□□□ -1.44
CLN5-212ENST00000636602 ZNF20P17024 532 aa6.05□□□□□ -1.44
CLN5-212ENST00000636602 PFKLP17858 780 aa6.05□□□□□ -1.44
CLN5-212ENST00000636602 GRIA2P42262 883 aa6.05□□□□□ -1.44
CLN5-212ENST00000636602 NMIQ13287 307 aaPredicted RBP6.05□□□□□ -1.44
CLN5-212ENST00000636602 HSF5Q4G112 596 aaPredicted RBP6.05□□□□□ -1.44
CLN5-212ENST00000636602 NOL9Q5SY16 702 aaKnown RBP6.05□□□□□ -1.44
CLN5-212ENST00000636602 NSMFQ6X4W1 530 aa6.05□□□□□ -1.44
CLN5-212ENST00000636602 KRT26Q7Z3Y9 468 aa6.05□□□□□ -1.44
CLN5-212ENST00000636602 ZNF513Q8N8E2 541 aaPredicted RBP6.05□□□□□ -1.44
CLN5-212ENST00000636602 ASCC2Q9H1I8 757 aaPredicted RBP6.05□□□□□ -1.44
CLN5-212ENST00000636602 TCFL5Q9UL49 500 aa6.05□□□□□ -1.44
CLN5-212ENST00000636602 AKT3Q9Y243 479 aa6.05□□□□□ -1.44
CLN5-212ENST00000636602 PCDHB12Q9Y5F1 795 aa6.05□□□□□ -1.44
CLN5-212ENST00000636602 SSU72P8A0A1W2PR75 194 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 WTIPA6NIX2 430 aaPredicted RBP6.04□□□□□ -1.44
CLN5-212ENST00000636602 FADS2P1A8MWK0 482 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 SHOXO15266 292 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 RFPL3O75679 317 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 PLA2G1BP04054 148 aaKnown RBP6.04□□□□□ -1.44
CLN5-212ENST00000636602 FGFR1P11362 822 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 PCBP3P57721 371 aaKnown RBP6.04□□□□□ -1.44
CLN5-212ENST00000636602 SUMO1P63165 101 aaKnown RBP6.04□□□□□ -1.44
CLN5-212ENST00000636602 CT47A1Q5JQC4 288 aaPredicted RBP6.04□□□□□ -1.44
CLN5-212ENST00000636602 POMZP3Q6PJE2 187 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 ZPBP2Q6X784 338 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 RPTNQ6XPR3 784 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 CRACR2BQ8N4Y2 399 aaPredicted RBP6.04□□□□□ -1.44
CLN5-212ENST00000636602 DAGLBQ8NCG7 672 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 FNIP1Q8TF40 1166 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 CHAC2Q8WUX2 184 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 DDX1Q92499 740 aaKnown RBP6.04□□□□□ -1.44
CLN5-212ENST00000636602 TCTN2Q96GX1 697 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 IER2Q9BTL4 223 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 METTL14Q9HCE5 456 aaKnown RBP6.04□□□□□ -1.44
CLN5-212ENST00000636602 DDX56Q9NY93 547 aaKnown RBP6.04□□□□□ -1.44
CLN5-212ENST00000636602 TNFRSF10DQ9UBN6 386 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 TAF6LQ9Y6J9 622 aa6.04□□□□□ -1.44
CLN5-212ENST00000636602 CYR61O00622 381 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 MARCH6O60337 910 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 KCNH1O95259 989 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 MSL3P1P0C860 447 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 TACR2P21452 398 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 ZNF445P59923 1031 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 PPP2R5DQ14738 602 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 NBPF9Q3BBW0 867 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 FNDC3BQ53EP0 1204 aaKnown RBP6.03□□□□□ -1.44
CLN5-212ENST00000636602 THNSL2Q86YJ6 484 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 TRIM59Q8IWR1 403 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 TTC9BQ8N6N2 239 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 LINC00116Q8NCU8 138 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 BTN2A2Q8WVV5 523 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 BRF1Q92994 677 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 OSBP2Q969R2 916 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 RCC1LQ96I51 464 aaKnown RBP6.03□□□□□ -1.44
CLN5-212ENST00000636602 MRGPRX3Q96LB0 322 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 CLUHP3Q96NS8 147 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 MRPL4Q9BYD3 311 aaKnown RBP6.03□□□□□ -1.44
CLN5-212ENST00000636602 TNFRSF12AQ9NP84 129 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 KLHL42Q9P2K6 505 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 CGGBP1Q9UFW8 167 aaPredicted RBP6.03□□□□□ -1.44
CLN5-212ENST00000636602 EMC9Q9Y3B6 208 aa6.03□□□□□ -1.44
CLN5-212ENST00000636602 SH3D21A4FU49 640 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 NOBOXO60393 691 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 PDE8AO60658 829 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms