RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 CDH22Q9UJ99 828 aa2.16□□□□□ -2.06
SYNGAP1-215ENST00000636443 WASF3Q9UPY6 502 aa2.16□□□□□ -2.06
SYNGAP1-215ENST00000636443 GREB1Q4ZG55 1949 aa2.16□□□□□ -2.06
SYNGAP1-215ENST00000636443 TRIP12Q14669 1992 aaPredicted RBP2.16□□□□□ -2.06
SYNGAP1-215ENST00000636443 CREBBPQ92793 2442 aa2.16□□□□□ -2.06
SYNGAP1-215ENST00000636443 GRIN2DO15399 1336 aa2.16□□□□□ -2.06
SYNGAP1-215ENST00000636443 FRMPD2Q68DX3 1309 aaPredicted RBP2.16□□□□□ -2.06
SYNGAP1-215ENST00000636443 MROH5Q6ZUA9 1318 aa2.16□□□□□ -2.06
SYNGAP1-215ENST00000636443 KIAA1217Q5T5P2 1943 aa2.15□□□□□ -2.06
SYNGAP1-215ENST00000636443 SPAARA0A1B0GVQ0 90 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 BLACEA4D250 179 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 C5orf67F2Z3F1 127 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 TM4SF5O14894 197 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 ADCY6O43306 1168 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 DIAPH2O60879 1101 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 LILRB3O75022 631 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 LGR5O75473 907 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 PARNO95453 639 aaKnown RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 EOMESO95936 686 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 IGHA2P01877 340 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 LDHBP07195 334 aaKnown RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 CEACAM1P13688 526 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 GLULP15104 373 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 HOXB8P17481 243 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 VCAM1P19320 739 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 IBSPP21815 317 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 GBP2P32456 591 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 MCAMP43121 646 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 USP14P54578 494 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 CNGB1Q14028 1251 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 BTG3Q14201 252 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 PTGISQ16647 500 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 TCTN1Q2MV58 587 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 ATAT1Q5SQI0 421 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 RARS2Q5T160 578 aaKnown RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 TMEM63BQ5T3F8 832 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 PLPP4Q5VZY2 271 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 HEATR6Q6AI08 1181 aaKnown RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 HIST2H2BCQ6DN03 193 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 PHLDB3Q6NSJ2 640 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 SLC4A10Q6U841 1118 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 CATSPERGQ6ZRH7 1159 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 SH3BP5LQ7L8J4 393 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 OTOP3Q7RTS5 596 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 LRP10Q7Z4F1 713 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 ZC3H18Q86VM9 953 aaKnown RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 CMTR1Q8N1G2 835 aaKnown RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 ZNF710Q8N1W2 664 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 TMEM87AQ8NBN3 555 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 CCDC191Q8NCU4 936 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 CAGE1Q8TC20 777 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 GPR152Q8TDT2 470 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 SHDQ96IW2 340 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 PHACTR3Q96KR7 559 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 KLHL5Q96PQ7 755 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 CDCA3Q99618 268 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 FAM126AQ9BYI3 521 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 SMOC1Q9H4F8 434 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 ZNF768Q9H5H4 540 aaKnown RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 KCNK12Q9HB15 430 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 LRRC4CQ9HCJ2 640 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 ENTPD7Q9NQZ7 604 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 POLR3EQ9NVU0 708 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 DLGAP2Q9P1A6 1054 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 SEPT3Q9UH03 358 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 PLAGL2Q9UPG8 496 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 DMXL2Q8TDJ6 3036 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 KALRNO60229 2985 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 MYH7BA7E2Y1 1941 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 MYH2Q9UKX2 1941 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 FRMPD4Q14CM0 1322 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 ADGRA3Q8IWK6 1321 aa2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 UBR5O95071 2799 aaPredicted RBP2.15□□□□□ -2.07
SYNGAP1-215ENST00000636443 COL5A1P20908 1838 aaPredicted RBP2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 KIAA1671Q9BY89 1806 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 FREM2Q5SZK8 3169 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 POLQO75417 2590 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 MCM3APO60318 1980 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 CACNA1IQ9P0X4 2223 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 PLXNA4Q9HCM2 1894 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 ZMYM2Q9UBW7 1377 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 DOPEY2Q9Y3R5 2298 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 TEX51A0A1B0GUA7 166 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 KANSL1LA0AUZ9 987 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 FAM170BA6NMN3 283 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 H0Y626 953 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 NCAM2O15394 837 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 TBC1D12O60347 775 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 NBNO60934 754 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 FLOT1O75955 427 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 TRIM16O95361 564 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 SLC25A27O95847 323 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 SNAI1O95863 264 aaPredicted RBP2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 ITGB1P05556 798 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 ZNF806P0C7X5 589 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 SRFP11831 508 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 DNAJB1P25685 340 aa2.14□□□□□ -2.07
SYNGAP1-215ENST00000636443 TNFRSF8P28908 595 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms