RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	KCTD1	Q719H9	257 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SH3RF1	Q7Z6J0	888 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	CCDC102A	Q96A19	550 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	NAA15	Q9BXJ9	866 aa	Known RBP	11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	CSRNP2	Q9H175	543 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	VPS54	Q9P1Q0	977 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	ECM29	Q5VYK3	1845 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	ATXN2	Q99700	1313 aa	Known RBP	11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102		F5H6K3	240 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	BMP6	P22004	513 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	EPHX2	P34913	555 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	MNAT1	P51948	309 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SET	Q01105	290 aa	Predicted RBP	11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	KLRC3	Q07444	240 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	ZNF543	Q08ER8	600 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SPATA1	Q5VX52	437 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SLFN13	Q68D06	897 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	CNPY4	Q8N129	248 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	LZTS2	Q9BRK4	669 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SH3GLB2	Q9NR46	395 aa		11.92	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SIPA1L1	O43166	1804 aa		11.91	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	POTEC	B2RU33	542 aa		11.91	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SLC16A2	P36021	539 aa		11.91	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	FILIP1L	Q4L180	1135 aa		11.91	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	ASPRV1	Q53RT3	343 aa		11.91	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	WDR93	Q6P2C0	686 aa		11.91	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	DCPS	Q96C86	337 aa	Known RBP	11.91	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	PNKP	Q96T60	521 aa		11.91	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	ADM5	C9JUS6	153 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SCG2	P13521	617 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	INPP5B	P32019	993 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	ATP2C1	P98194	919 aa	Predicted RBP	11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	PRKG1	Q13976	671 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	PFKFB3	Q16875	520 aa	Predicted RBP	11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	CCDC96	Q2M329	555 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	KIAA1755	Q5JYT7	1200 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	KAT2B	Q92831	832 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	NUP88	Q99567	741 aa	Predicted RBP	11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SPZ1	Q9BXG8	430 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102		A0A1B0GTH6	734 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	PRPF6	O94906	941 aa	Known RBP	11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	NDUFB10	O96000	172 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	ASNS	P08243	561 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SLC1A4	P43007	532 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SPAG1	Q07617	926 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	NR1I3	Q14994	352 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	TTC38	Q5R3I4	469 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	DCAF15	Q66K64	600 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	GALNT17	Q6IS24	598 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	USP50	Q70EL3	339 aa	Predicted RBP	11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	SPICE1	Q8N0Z3	855 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	OXER1	Q8TDS5	423 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	TNFRSF25	Q93038	417 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	PANX2	Q96RD6	677 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	PIGS	Q96S52	555 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	RIOX1	Q9H6W3	641 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	RMND1	Q9NWS8	449 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	TMX2	Q9Y320	296 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	PPP2R3B	Q9Y5P8	575 aa		11.9	□□□□□ -0.5
ARHGEF9-223	ENST00000636102	PITPNM2	Q9BZ72	1349 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SBF1	O95248	1867 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CCDC189	A1A4V9	331 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	EBAG9	O00559	213 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CTNND1	O60716	968 aa	Known RBP	11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	RNF40	O75150	1001 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CCDC175	P0C221	793 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	MCM3	P25205	808 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SMARCA1	P28370	1054 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	WHAMMP3	Q1A5X7	153 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	EAPP	Q56P03	285 aa	Predicted RBP	11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SPECC1	Q5M775	1068 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	GPATCH4	Q5T3I0	446 aa	Known RBP	11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	KCNV1	Q6PIU1	500 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SULF1	Q8IWU6	871 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ADGRF4	Q8IZF3	695 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PRPF38A	Q8NAV1	312 aa	Known RBP	11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	GMCL1P1	Q8NEA9	526 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CCDC51	Q96ER9	411 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	PAGE5	Q96GU1	130 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ZNF341	Q9BYN7	854 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ARHGEF10L	Q9HCE6	1279 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ZNF112	Q9UJU3	913 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	FOXN1	O15353	648 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	CALR	P27797	417 aa	Known RBP	11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	GRIN1	Q05586	938 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	ZYX	Q15942	572 aa	Known RBP	11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	SUPT20HL1	Q3ZLR7	823 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	TYW1B	Q6NUM6	668 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	KRT26	Q7Z3Y9	468 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	DCAF4	Q8WV16	495 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	RRP36	Q96EU6	259 aa	Known RBP	11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	JMJD4	Q9H9V9	463 aa		11.89	□□□□□ -0.51
ARHGEF9-223	ENST00000636102	USP17L10	C9JJH3	530 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms