RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CALML4Q96GE6 196 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 BAZ2AQ9UIF9 1905 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 PVALEFA0A1B0GWK0 134 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 EPHB6O15197 1021 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 EVA1CP58658 441 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 GUCY1A3Q02108 690 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 UBE4AQ14139 1066 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 LRIG3Q6UXM1 1119 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 NLRP14Q86W24 1093 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 KIAA0895Q8NCT3 520 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 CCT8L2Q96SF2 557 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 CXorf56Q9H5V9 222 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 SALL4Q9UJQ4 1053 aa16.36■□□□□ 0.21
CACNA1A-220ENST00000635988 CHUKO15111 745 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 BRD2P25440 801 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 SMTNP53814 917 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 TNNC1P63316 161 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 GRM4Q14833 912 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 CDC37Q16543 378 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 KRT25Q7Z3Z0 450 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 GUF1Q8N442 669 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 MYCBPAPQ8TBZ2 947 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 PIK3R5Q8WYR1 880 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 ANKS1AQ92625 1134 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 VCPKMTQ9H867 229 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 BARHL2Q9NY43 387 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 FAM153BP0C7A2 387 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 GFPT1Q06210 699 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 ACTN3Q08043 901 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 ORC2Q13416 577 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 FAM153CQ494X1 144 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 SV2BQ7L1I2 683 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 MS4A14Q96JA4 679 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 SLC4A9Q96Q91 983 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 FAM153AQ9UHL3 310 aa16.35■□□□□ 0.21
CACNA1A-220ENST00000635988 MYO1FO00160 1098 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 BUB1O43683 1085 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 RDXP35241 583 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 HSPA9P38646 679 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 SLC1A4P43007 532 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 GYG1P46976 350 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 TDRD12Q587J7 1177 aaKnown RBP16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 UNC13DQ70J99 1090 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 ANKRD13CQ8N6S4 541 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 PNMA1Q8ND90 353 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 ACTR5Q9H9F9 607 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 STK17AQ9UEE5 414 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 CES2O00748 559 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 SERPING1P05155 500 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 CCDC172P0C7W6 258 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 ITGB3BPQ13352 177 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 NAB2Q15742 525 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 RNF187Q5TA31 235 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 TSG101Q99816 390 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 SLC39A2Q9NP94 309 aa16.34■□□□□ 0.21
CACNA1A-220ENST00000635988 SLIT2O94813 1529 aa16.33■□□□□ 0.21
CACNA1A-220ENST00000635988 MYH10P35580 1976 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 HGSNATQ68CP4 663 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 LZTS2Q9BRK4 669 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 RIC8AQ9NPQ8 531 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 PLCB1Q9NQ66 1216 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 CEP72Q9P209 647 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 BCL9O00512 1426 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 BAZ2BQ9UIF8 2168 aaKnown RBP16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 A0A1B0GUL6 1792 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 GOLGA6L7A0A1B0GV03 622 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 STXBP3O00186 592 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 NONOQ15233 471 aaKnown RBP eCLIP16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 MAATS1Q7Z4T9 603 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 PROM2Q8N271 834 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 CASKIN2Q8WXE0 1202 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 KRT12Q99456 494 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 TMBIM4Q9HC24 238 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 PCDHGC5Q9Y5F6 944 aa16.33■□□□□ 0.2
CACNA1A-220ENST00000635988 COL1A1P02452 1464 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 PALMO75781 387 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 MMP14P50281 582 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 GUCY2FP51841 1108 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 CUL1Q13616 776 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 CCDC40Q4G0X9 1142 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 MEI1Q5TIA1 1274 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 SFMBT2Q5VUG0 894 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 NSUN4Q96CB9 384 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 LRRC45Q96CN5 670 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 INPP4AQ96PE3 977 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 LRRC27Q9C0I9 530 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 TAF1DQ9H5J8 278 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 KLC4Q9NSK0 619 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 PLAAQ9Y263 795 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 CASZ1Q86V15 1759 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 ESYT3A0FGR9 886 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 GCOM1H8Y6P7 765 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 CCNT1O60563 726 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
CACNA1A-220ENST00000635988 MYZAPP0CAP1 466 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms