RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 SYNE4Q8N205 404 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 MICAL1Q8TDZ2 1067 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 ERGIC2Q96RQ1 377 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 CD248Q9HCU0 757 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 DONSONQ9NYP3 566 aa9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 REXO2Q9Y3B8 237 aaKnown RBP9.22□□□□□ -0.93
SMARCA2-246ENST00000635739 CCDC169A6NNP5 214 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 PP2D1A8MPX8 630 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 FSBPO95073 299 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 BAG3O95817 575 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 PPP2R2AP63151 447 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 FKBP3Q00688 224 aaKnown RBP9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 DHX9Q08211 1270 aaKnown RBP9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 PPP2R5EQ16537 467 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 ZNF662Q6ZS27 426 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 APTXQ7Z2E3 356 aaKnown RBP9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 MS4A14Q96JA4 679 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 EDEM3Q9BZQ6 932 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 CCSER1Q9C0I3 900 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 SLC40A1Q9NP59 571 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 RIC8AQ9NPQ8 531 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 FAM114A2Q9NRY5 505 aa9.21□□□□□ -0.93
SMARCA2-246ENST00000635739 CYP2D7A0A087X1C5 515 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 ATP11AP98196 1134 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 HDLBPQ00341 1268 aaKnown RBP9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 LRRC63Q05C16 580 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 CALCRLQ16602 461 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 MEA1Q16626 185 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 FIGNQ5HY92 759 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 HAUS3Q68CZ6 603 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 NEK8Q86SG6 692 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 CREG2Q8IUH2 290 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 CCDC13Q8IYE1 715 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 LZTS2Q9BRK4 669 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 TRIM6Q9C030 488 aaPredicted RBP9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 KLK7P49862 253 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 PTPROQ16827 1216 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 TAOK1Q7L7X3 1001 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 CADPS2Q86UW7 1296 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 PRPF38AQ8NAV1 312 aaKnown RBP9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 CYFIP2Q96F07 1278 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 VCPKMTQ9H867 229 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 ADAMTS1Q9UHI8 967 aa9.21□□□□□ -0.94
SMARCA2-246ENST00000635739 SMCO2A6NFE2 343 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 CCDC188H7C350 402 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 FOXP2O15409 715 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 H2AFZP0C0S5 128 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 SLC1A4P43007 532 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 TNNI2P48788 182 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 HERC4Q5GLZ8 1057 aaPredicted RBP9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 H2AFVQ71UI9 128 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 NELFCDQ8IXH7 590 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 HVCN1Q96D96 273 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 SGSM3Q96HU1 749 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 EHD2Q9NZN4 543 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 ARPP21Q9UBL0 812 aaPredicted RBP9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 AMFRQ9UKV5 643 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 ABCC6O95255 1503 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 SSU72P8A0A1W2PR75 194 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 EIF3BP55884 814 aaKnown RBP9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 TTI2Q6NXR4 508 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 LARP4BQ92615 738 aaKnown RBP9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 TRIM7Q9C029 511 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 INTS9Q9NV88 658 aaKnown RBP9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 GSTTP1A0A1W2PQM5 241 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 SNAP23O00161 211 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 LDHCP07864 332 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 PLEKP08567 350 aaPredicted RBP9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 WDR59Q6PJI9 974 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 LRIG3Q6UXM1 1119 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 REXO1Q8N1G1 1221 aaKnown RBP9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 TSEN2Q8NCE0 465 aaKnown RBP9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 TRIM9Q9C026 710 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 SH3GLB2Q9NR46 395 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 STK17AQ9UEE5 414 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 NIP7Q9Y221 180 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 ATP8A1Q9Y2Q0 1164 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 COL4A3BPQ9Y5P4 624 aa9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.2□□□□□ -0.94
SMARCA2-246ENST00000635739 AGPSO00116 658 aa9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 MAGOHP61326 146 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 DYNLL1P63167 89 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 DCAF17Q5H9S7 520 aaPredicted RBP9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 EARS2Q5JPH6 523 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 FAM26FQ5R3K3 315 aa9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 CCDC25Q86WR0 208 aa9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 SRBD1Q8N5C6 995 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 CTNNBL1Q8WYA6 563 aaPredicted RBP9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 MAGOHBQ96A72 148 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 KCNK9Q9NPC2 374 aa9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 TBC1D7Q9P0N9 293 aa9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 BZW2Q9Y6E2 419 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 FMN2Q9NZ56 1722 aa9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 STK4Q13043 487 aa9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 CALCOCO2Q13137 446 aa9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 SEPT7Q16181 437 aaKnown RBP9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 CDC37Q16543 378 aaPredicted RBP9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 C10orf76Q5T2E6 689 aa9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 PDXDC1Q6P996 788 aa9.19□□□□□ -0.94
SMARCA2-246ENST00000635739 YTHDF3Q7Z739 585 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms