RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 RILPL1Q5EBL4 403 aa16.41■□□□□ 0.22
LINC00339-208ENST00000634934 TTC38Q5R3I4 469 aa16.41■□□□□ 0.22
LINC00339-208ENST00000634934 NPLOC4Q8TAT6 608 aa16.41■□□□□ 0.22
LINC00339-208ENST00000634934 USP6NLQ92738 828 aa16.41■□□□□ 0.22
LINC00339-208ENST00000634934 IWS1Q96ST2 819 aa16.41■□□□□ 0.22
LINC00339-208ENST00000634934 MPHOSPH6Q99547 160 aaKnown RBP16.41■□□□□ 0.22
LINC00339-208ENST00000634934 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
LINC00339-208ENST00000634934 SRRDQ9UH36 339 aa16.41■□□□□ 0.22
LINC00339-208ENST00000634934 PTCH2Q9Y6C5 1203 aa16.41■□□□□ 0.22
LINC00339-208ENST00000634934 ASB14A6NK59 587 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 CCNT1O60563 726 aaKnown RBP16.4■□□□□ 0.22
LINC00339-208ENST00000634934 TRAPPC10P48553 1259 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 FLT3LGP49771 235 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 TOB1P50616 345 aaPredicted RBP16.4■□□□□ 0.22
LINC00339-208ENST00000634934 USP11P51784 963 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 PDE4DQ08499 809 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 CCDC173Q0VFZ6 552 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 ZNF174Q15697 407 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 HS1BP3Q53T59 392 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 PCNX4Q63HM2 1172 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 CRYGNQ8WXF5 182 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 MAML3Q96JK9 1138 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 APBA2Q99767 749 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 RTEL1Q9NZ71 1219 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 DIS3Q9Y2L1 958 aaKnown RBP16.4■□□□□ 0.22
LINC00339-208ENST00000634934 WNT7AO00755 349 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 TDP2O95551 362 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 CYP3A4P08684 503 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 HOXC6P09630 235 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 CEBPZQ03701 1054 aaKnown RBP16.4■□□□□ 0.22
LINC00339-208ENST00000634934 STXBP2Q15833 593 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 FBXO46Q6PJ61 603 aaPredicted RBP16.4■□□□□ 0.22
LINC00339-208ENST00000634934 VSIG10LQ86VR7 867 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 CHAMP1Q96JM3 812 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 ZNF396Q96N95 335 aaPredicted RBP16.4■□□□□ 0.22
LINC00339-208ENST00000634934 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
LINC00339-208ENST00000634934 LMBRD1Q9NUN5 540 aa16.4■□□□□ 0.22
LINC00339-208ENST00000634934 TFIP11Q9UBB9 837 aaKnown RBP16.4■□□□□ 0.22
LINC00339-208ENST00000634934 EDIL3O43854 480 aa16.39■□□□□ 0.21
LINC00339-208ENST00000634934 GNRH1P01148 92 aa16.39■□□□□ 0.21
LINC00339-208ENST00000634934 NCLP19338 710 aaKnown RBP16.39■□□□□ 0.21
LINC00339-208ENST00000634934 MCM7P33993 719 aa16.39■□□□□ 0.21
LINC00339-208ENST00000634934 DNM1Q05193 864 aaKnown RBP16.39■□□□□ 0.21
LINC00339-208ENST00000634934 CCL14Q16627 93 aa16.39■□□□□ 0.21
LINC00339-208ENST00000634934 XRRA1Q6P2D8 792 aa16.39■□□□□ 0.21
LINC00339-208ENST00000634934 ZNF467Q7Z7K2 595 aaPredicted RBP16.39■□□□□ 0.21
LINC00339-208ENST00000634934 NAP1L4Q99733 375 aaKnown RBP16.39■□□□□ 0.21
LINC00339-208ENST00000634934 FTOQ9C0B1 505 aaKnown RBP eCLIP16.39■□□□□ 0.21
LINC00339-208ENST00000634934 RRAGDQ9NQL2 400 aaPredicted RBP16.39■□□□□ 0.21
LINC00339-208ENST00000634934 PCDHB6Q9Y5E3 794 aa16.39■□□□□ 0.21
LINC00339-208ENST00000634934 ZNFX1Q9P2E3 1918 aaKnown RBP16.39■□□□□ 0.21
LINC00339-208ENST00000634934 FAM86B1E9PN63 330 aa16.38■□□□□ 0.21
LINC00339-208ENST00000634934 FAM86B2P0C5J1 330 aa16.38■□□□□ 0.21
LINC00339-208ENST00000634934 EDNRBP24530 442 aa16.38■□□□□ 0.21
LINC00339-208ENST00000634934 MRPS9P82933 396 aaKnown RBP16.38■□□□□ 0.21
LINC00339-208ENST00000634934 PKN2Q16513 984 aaKnown RBP16.38■□□□□ 0.21
LINC00339-208ENST00000634934 CEP55Q53EZ4 464 aa16.38■□□□□ 0.21
LINC00339-208ENST00000634934 PRR16Q569H4 304 aa16.38■□□□□ 0.21
LINC00339-208ENST00000634934 ARMCX2Q7L311 632 aa16.38■□□□□ 0.21
LINC00339-208ENST00000634934 EEPD1Q7L9B9 569 aa16.38■□□□□ 0.21
LINC00339-208ENST00000634934 CYP2W1Q8TAV3 490 aa16.38■□□□□ 0.21
LINC00339-208ENST00000634934 ABHD8Q96I13 439 aa16.38■□□□□ 0.21
LINC00339-208ENST00000634934 TINF2Q9BSI4 451 aa16.38■□□□□ 0.21
LINC00339-208ENST00000634934 DDX25Q9UHL0 483 aaKnown RBP16.38■□□□□ 0.21
LINC00339-208ENST00000634934 LCTP09848 1927 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 ZNF236Q9UL36 1845 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 LOC102724159A0A0B4J2E5 919 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 EIF3JO75822 258 aaKnown RBP16.37■□□□□ 0.21
LINC00339-208ENST00000634934 MBD3O95983 291 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 XRCC5P13010 732 aaKnown RBP16.37■□□□□ 0.21
LINC00339-208ENST00000634934 GCFC2P16383 781 aaKnown RBP16.37■□□□□ 0.21
LINC00339-208ENST00000634934 CIITAP33076 1130 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 PWP2Q15269 919 aaKnown RBP16.37■□□□□ 0.21
LINC00339-208ENST00000634934 ANO1Q5XXA6 986 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 PPP4R3AQ6IN85 833 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 GAS2L3Q86XJ1 694 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 RAET1EQ8TD07 263 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 SH3TC2Q8TF17 1288 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 USP28Q96RU2 1077 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 MXRA8Q9BRK3 442 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 PANK2Q9BZ23 570 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 FLRT1Q9NZU1 646 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 CLIC4Q9Y696 253 aa16.37■□□□□ 0.21
LINC00339-208ENST00000634934 CYP3A7-CYP3A51PA0A087WV96 503 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 SLC37A4O43826 429 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 ELNP15502 786 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 ITGB5P18084 799 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 CYP3A7P24462 503 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 SF3A1Q15459 793 aaKnown RBP16.36■□□□□ 0.21
LINC00339-208ENST00000634934 MOXD1Q6UVY6 613 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 MAMDC4Q6UXC1 1216 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 NLRX1Q86UT6 975 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 PLA2G4DQ86XP0 818 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 MORC4Q8TE76 937 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 UIMC1Q96RL1 719 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.36■□□□□ 0.21
LINC00339-208ENST00000634934 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.36■□□□□ 0.21
LINC00339-208ENST00000634934 CFAP45Q9UL16 551 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 UBIAD1Q9Y5Z9 338 aa16.36■□□□□ 0.21
LINC00339-208ENST00000634934 MYH7BA7E2Y1 1941 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms