RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 TTC19Q6DKK2 380 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 OR6B2Q6IFH4 312 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 TTC23LQ6PF05 361 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 CATSPER4Q7RTX7 472 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 ZNF654Q8IZM8 581 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 GPKOWQ92917 476 aaPredicted RBP eCLIP6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 TRIM11Q96F44 468 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 SUCLG2Q96I99 432 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 LEMD3Q9Y2U8 911 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 KRIT1O00522 736 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 MCF2LO15068 1137 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 TTI1O43156 1089 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 CHEK2O96017 543 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 EVCP57679 992 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 KRT40Q6A162 431 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 SCN4BQ8IWT1 228 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 CXorf38Q8TB03 319 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 SDR42E1Q8WUS8 393 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 IFT43Q96FT9 208 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 NXF1Q9UBU9 619 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 MAP3K19Q56UN5 1328 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 CFAP43Q8NDM7 1665 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 BAG2O95816 211 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 SRGAP2CP0DJJ0 459 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 MXD4Q14582 209 aaPredicted RBP6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 PDCD6IPQ8WUM4 868 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 PBXIP1Q96AQ6 731 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 METTL14Q9HCE5 456 aaKnown RBP6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 KRT82Q9NSB4 513 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 TLK1Q9UKI8 766 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 PBRM1Q86U86 1689 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 USP17L3A6NCW0 530 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 USP17L4A6NCW7 530 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 GOLGA8SH3BPF8 625 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 KCNK3O14649 394 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 MX2P20592 715 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 SERPINB6P35237 376 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 FANCCQ00597 558 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 SURF1Q15526 300 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 USP17L1Q7RTZ2 530 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 TADA2BQ86TJ2 420 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 NLRP4Q96MN2 994 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 KRT24Q2M2I5 525 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 CCDC157Q569K6 752 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 KLC3Q6P597 504 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 STAMQ92783 540 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 TBC1D32Q96NH3 1257 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 PLEKHA4Q9H4M7 779 aa6.97□□□□□ -1.29
SRGAP1-207ENST00000631006 NDUFAB1O14561 156 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 DDAH1O94760 285 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 BRD1O95696 1058 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 CRKLP46109 303 aaKnown RBP6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 CCDC38Q502W7 563 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 ASPRV1Q53RT3 343 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 DARS2Q6PI48 645 aaKnown RBP6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 KBTBD3Q8NAB2 608 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 BABAM1Q9NWV8 329 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 MAP10Q9P2G4 905 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 TBX22Q9Y458 520 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 HYOU1Q9Y4L1 999 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 EFCAB14O75071 495 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 MOCS3O95396 460 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 LMNB2Q03252 620 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 ADAM9Q13443 819 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 KRT71Q3SY84 523 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 MORC4Q8TE76 937 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 DONSONQ9NYP3 566 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.29
SRGAP1-207ENST00000631006 SART1O43290 800 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 DRP2Q13474 957 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 SYDE2Q5VT97 1194 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 SRRM1Q8IYB3 904 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 TCP11Q8WWU5 503 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 DHX38Q92620 1227 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 FAM81BQ96LP2 452 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 BLMP54132 1417 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 CREB3O43889 395 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 PRPSAP2O60256 369 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 PAMP19021 973 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 OR6B3Q8NGW1 331 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 EXT2Q93063 718 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 STK38LQ9Y2H1 464 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 ZNF202O95125 648 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 CPA1P15085 419 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 ANKRD20A4Q4UJ75 823 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 ANKRD20A8PQ5CZ79 823 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 ANKRD20A2Q5SQ80 823 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 ANKRD20A1Q5TYW2 823 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 TWF2Q6IBS0 349 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 PDXDC2PQ6P474 469 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 TRIM67Q6ZTA4 783 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 ANKS3Q6ZW76 656 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 CMTR1Q8N1G2 835 aaKnown RBP6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 RUNDC3BQ96NL0 473 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 SCHIP1Q9P0W5 487 aaPredicted RBP6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 EPS15L1Q9UBC2 864 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 A6NNZ2 444 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 PRPF4O43172 522 aaKnown RBP eCLIP6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 GAP43P17677 238 aa6.96□□□□□ -1.3
SRGAP1-207ENST00000631006 VEPH1Q14D04 833 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms