RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 OPLAHO14841 1288 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 FGBP02675 491 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 DNAJB2P25686 324 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 COL9A3Q14050 684 aaPredicted RBP10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 PPP2R5BQ15173 497 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 ANKRD1Q15327 319 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 NBPF20Q3BBV1 942 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 ASPRV1Q53RT3 343 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 RASIP1Q5U651 963 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 DHX32Q7L7V1 743 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 OTOP2Q7RTS6 562 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 FBXO11Q86XK2 927 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 ZFP91Q96JP5 570 aaPredicted RBP10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 TCEANC2Q96MN5 208 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 PBX4Q9BYU1 374 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 CNNM2Q9H8M5 875 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 MAD2L2Q9UI95 211 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 PNMA2Q9UL42 364 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 ABCB11O95342 1321 aa10.49□□□□□ -0.73
SPTAN1-219ENST00000629378 LOC102724159A0A0B4J2E5 919 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 PALM3A6NDB9 673 aaPredicted RBP10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 A6NJR5 290 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 SORBS3O60504 671 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 CFBP00751 764 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 EIF2AK2P19525 551 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 CPT1AP50416 773 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 CUL4AQ13619 759 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 PWP2Q15269 919 aaKnown RBP10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 FAM47CQ5HY64 1035 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 CCDC62Q6P9F0 684 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 MAFAQ8NHW3 353 aaPredicted RBP10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 SCFD2Q8WU76 684 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 AFG1LQ8WV93 481 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 HERVK_113Q902F9 699 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 TIFAQ96CG3 184 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 ZSCAN31Q96LW9 406 aaPredicted RBP10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 RMDN3Q96TC7 470 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 MTG1Q9BT17 334 aaPredicted RBP10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 ZNF576Q9H609 170 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 GPHNQ9NQX3 736 aaPredicted RBP10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 POLR3EQ9NVU0 708 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 CHMP5Q9NZZ3 219 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 SCN10AQ9Y5Y9 1956 aa10.48□□□□□ -0.73
SPTAN1-219ENST00000629378 CHD9Q3L8U1 2897 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 IFIT3O14879 490 aaKnown RBP10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 MYCLP12524 364 aaPredicted RBP10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 MYOGP15173 224 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 FOSL2P15408 326 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 DDIT3P35638 169 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 RABGGTBP53611 331 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 EXOSC10Q01780 885 aaKnown RBP10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 TTLL4Q14679 1199 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 ARHGEF16Q5VV41 709 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 Q6ZUG5 572 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 DEFB128Q7Z7B8 93 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 HOMER1Q86YM7 354 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 MCF2L2Q86YR7 1114 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 NCOA7Q8NI08 942 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 NSUN6Q8TEA1 469 aaKnown RBP10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 PIBF1Q8WXW3 757 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 MTMR8Q96EF0 704 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 PIGSQ96S52 555 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 MPHOSPH6Q99547 160 aaKnown RBP10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 PXMP2Q9NR77 195 aa10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 MRPL11Q9Y3B7 192 aaKnown RBP10.47□□□□□ -0.73
SPTAN1-219ENST00000629378 B4DLN1 442 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 NKRFO15226 690 aaKnown RBP eCLIP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 CYTH3O43739 400 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 NR3C2P08235 984 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 NT5C2P49902 561 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 MRPL12P52815 198 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 ANTXR2P58335 489 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 FGD1P98174 961 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 ARHGAP1Q07960 439 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 TRDNQ13061 729 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 TOB2Q14106 344 aaPredicted RBP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 GRM4Q14833 912 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 STXBP2Q15833 593 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 PSRC1Q6PGN9 363 aaPredicted RBP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 RALYLQ86SE5 291 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 USP38Q8NB14 1042 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 KAT2BQ92831 832 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 INTS4Q96HW7 963 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 IWS1Q96ST2 819 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 AMNQ9BXJ7 453 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 COL25A1Q9BXS0 654 aaPredicted RBP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 LRRC2Q9BYS8 371 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 NKX2-4Q9H2Z4 354 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 PRDM12Q9H4Q4 367 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 BCAS3Q9H6U6 928 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 SH2B1Q9NRF2 756 aaPredicted RBP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 DDX41Q9UJV9 622 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 TPCN1Q9ULQ1 816 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 YBX2Q9Y2T7 364 aaKnown RBP10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 PCDHA1Q9Y5I3 950 aa10.46□□□□□ -0.73
SPTAN1-219ENST00000629378 MYO9BQ13459 2157 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms