RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 RASSF10A6NK89 507 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 BIN1O00499 593 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 KRT14P02533 472 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 NEK4P51957 841 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 ACCSLQ4AC99 568 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 SUSD4Q5VX71 490 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 INTS5Q6P9B9 1019 aaKnown RBP10.11□□□□□ -0.79
USB1-216ENST00000624720 GPR161Q8N6U8 529 aaKnown RBP10.11□□□□□ -0.79
USB1-216ENST00000624720 RPGRQ92834 1020 aaKnown RBP10.11□□□□□ -0.79
USB1-216ENST00000624720 C8orf48Q96LL4 319 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 JAKMIP1Q96N16 626 aaKnown RBP10.11□□□□□ -0.79
USB1-216ENST00000624720 ESYT1Q9BSJ8 1104 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 FAM204AQ9H8W3 233 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 C2CD2Q9Y426 696 aa10.11□□□□□ -0.79
USB1-216ENST00000624720 USP27XA6NNY8 438 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 RBP3P10745 1247 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 ITGA6P23229 1130 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 PDE6CP51160 858 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 COL9A3Q14050 684 aaPredicted RBP10.1□□□□□ -0.79
USB1-216ENST00000624720 SAFBQ15424 915 aaKnown RBP eCLIP10.1□□□□□ -0.79
USB1-216ENST00000624720 LDHAL6AQ6ZMR3 332 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 FCHSD1Q86WN1 690 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 CNTROBQ8N137 903 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 FRS2Q8WU20 508 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 FNBP1Q96RU3 617 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 DISC1Q9NRI5 854 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 GTF3C4Q9UKN8 822 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 COL14A1Q05707 1796 aaKnown RBP10.1□□□□□ -0.79
USB1-216ENST00000624720 LRRIQ3A6PVS8 624 aaPredicted RBP10.1□□□□□ -0.79
USB1-216ENST00000624720 HNRNPCP07910 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
USB1-216ENST00000624720 ALDH3A1P30838 453 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 PSMC4P43686 418 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 RFX5P48382 616 aaPredicted RBP10.1□□□□□ -0.79
USB1-216ENST00000624720 CASP7P55210 303 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 GSTM4Q03013 218 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 MYO1EQ12965 1108 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 IFIT5Q13325 482 aaKnown RBP10.1□□□□□ -0.79
USB1-216ENST00000624720 TNNI3KQ59H18 835 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 TCERG1LQ5VWI1 586 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 PRPF40BQ6NWY9 871 aaKnown RBP10.1□□□□□ -0.79
USB1-216ENST00000624720 B4GALNT4Q76KP1 1039 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 TAOK1Q7L7X3 1001 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 KRT27Q7Z3Y8 459 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 PPFIBP1Q86W92 1011 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 PAF1Q8N7H5 531 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 ZNF75CPQ92670 426 aaPredicted RBP10.1□□□□□ -0.79
USB1-216ENST00000624720 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
USB1-216ENST00000624720 CCNL1Q9UK58 526 aaPredicted RBP10.1□□□□□ -0.79
USB1-216ENST00000624720 FPGT-TNNI3KV9GXZ4 949 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 SALL3Q9BXA9 1300 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 SCN11AQ9UI33 1791 aa10.1□□□□□ -0.79
USB1-216ENST00000624720 ATRNO75882 1429 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 MEFVO15553 781 aaPredicted RBP10.09□□□□□ -0.79
USB1-216ENST00000624720 TADA3O75528 432 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 MYBL1P10243 752 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 KLC1Q07866 573 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 CYB5D1Q6P9G0 228 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 CEP128Q6ZU80 1094 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 RNF10Q8N5U6 811 aaKnown RBP10.09□□□□□ -0.79
USB1-216ENST00000624720 MSANTD4Q8NCY6 345 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 SGCDQ92629 289 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 DRC3Q9H069 523 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 OCEL1Q9H607 264 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 KMT5AQ9NQR1 393 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 MTUS1Q9ULD2 1270 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 KIAA1257Q9ULG3 409 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 JAG2Q9Y219 1238 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 ARIH1Q9Y4X5 557 aaPredicted RBP10.09□□□□□ -0.79
USB1-216ENST00000624720 PLCH1Q4KWH8 1693 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 DISP2A7MBM2 1401 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 BCL9LQ86UU0 1499 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.09□□□□□ -0.79
USB1-216ENST00000624720 LRRD1A4D1F6 860 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 MGRN1O60291 552 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 BUB1BO60566 1050 aaPredicted RBP10.09□□□□□ -0.79
USB1-216ENST00000624720 N4BP1O75113 896 aaKnown RBP10.09□□□□□ -0.79
USB1-216ENST00000624720 CYP4A11Q02928 519 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 PTH1RQ03431 593 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 PAK2Q13177 524 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 SLC44A4Q53GD3 710 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 METTL24Q5JXM2 366 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 TTC39BQ5VTQ0 682 aaPredicted RBP10.09□□□□□ -0.79
USB1-216ENST00000624720 USPL1Q5W0Q7 1092 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 HDXQ7Z353 690 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 EXOC3L1Q86VI1 746 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 FLCNQ8NFG4 579 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 AFAP1L1Q8TED9 768 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 RPGRIP1Q96KN7 1286 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 NDNQ99608 321 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 ABCG4Q9H172 646 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 EBF2Q9HAK2 575 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 ZNF180Q9UJW8 692 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 SLIT2O94813 1529 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 KCPQ6ZWJ8 1503 aa10.09□□□□□ -0.79
USB1-216ENST00000624720 ZBED4O75132 1171 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 GLRX3O76003 335 aaKnown RBP10.08□□□□□ -0.8
USB1-216ENST00000624720 SKIP12755 728 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 CDC25CP30307 473 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 MXRA7P84157 204 aa10.08□□□□□ -0.8
USB1-216ENST00000624720 NMIQ13287 307 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms