RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SLC4A9Q96Q91 983 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 CTTNBP2NLQ9P2B4 639 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 ADAMTS1Q9UHI8 967 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 RASAL2Q9UJF2 1139 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 PCDHA6Q9UN73 950 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 PCDHA8Q9Y5H6 950 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 CLIC2O15247 247 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 SPOPO43791 374 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 MYCLP12524 364 aaPredicted RBP14.14□□□□□ -0.15
MSH6-215ENST00000622629 CTNNA2P26232 953 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 NFIXQ14938 502 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 EXOC3L4Q17RC7 722 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 EARS2Q5JPH6 523 aaKnown RBP14.14□□□□□ -0.15
MSH6-215ENST00000622629 TTC19Q6DKK2 380 aaPredicted RBP14.14□□□□□ -0.15
MSH6-215ENST00000622629 FAM133AQ8N9E0 248 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 FAM71BQ8TC56 605 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 RIOK1Q9BRS2 568 aaKnown RBP14.14□□□□□ -0.15
MSH6-215ENST00000622629 KANSL2Q9H9L4 492 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 TCP10L2B9ZVM9 353 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 GYPCP04921 128 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 KCTD16Q68DU8 428 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 FBXO33Q7Z6M2 555 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 NBPF3Q9H094 633 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 MED4Q9NPJ6 270 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 RIC8AQ9NPQ8 531 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 TRIM10Q9UDY6 481 aa14.14□□□□□ -0.15
MSH6-215ENST00000622629 ANKRD62A6NC57 917 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 NAA35Q5VZE5 725 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 CPLX4Q7Z7G2 160 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 SLFN12Q8IYM2 578 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 CCDC17Q96LX7 622 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 EMILIN3Q9NT22 766 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 PCDHA13Q9Y5I0 950 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 PLA2G4BP0C869 781 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 EEF2P13639 858 aaKnown RBP14.13□□□□□ -0.15
MSH6-215ENST00000622629 MAP3K9P80192 1104 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 SEC23AQ15436 765 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 ABCB5Q2M3G0 1257 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 USP37Q86T82 979 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 FAM178BQ8IXR5 827 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 ADAM21Q9UKJ8 722 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 ATP6V0A2Q9Y487 856 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 JRKLQ9Y4A0 524 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 BACH1O14867 736 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 RNF40O75150 1001 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 ZSCAN20P17040 1043 aaPredicted RBP14.13□□□□□ -0.15
MSH6-215ENST00000622629 ANKRD40Q6AI12 368 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 NSMFQ6X4W1 530 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 GBP6Q6ZN66 633 aa14.13□□□□□ -0.15
MSH6-215ENST00000622629 PPIP5K2O43314 1243 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 H2AFZP0C0S5 128 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 EN1Q05925 392 aaPredicted RBP14.12□□□□□ -0.15
MSH6-215ENST00000622629 STK4Q13043 487 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 H2AFVQ71UI9 128 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 TXNRD3Q86VQ6 643 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 VGLL2Q8N8G2 317 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 KRT12Q99456 494 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 TRIM9Q9C026 710 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 PNMA6FA0A0J9YX94 578 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 UNC13DQ70J99 1090 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 ADSSL1Q8N142 457 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 LARGE2Q8N3Y3 721 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 NEDD1Q8NHV4 660 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 AGPAT5Q9NUQ2 364 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 LIMA1Q9UHB6 759 aaKnown RBP14.12□□□□□ -0.15
MSH6-215ENST00000622629 PPP1R3GB7ZBB8 358 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 KRT5P13647 590 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 TBC1D10BQ4KMP7 808 aaPredicted RBP14.12□□□□□ -0.15
MSH6-215ENST00000622629 GSPT2Q8IYD1 628 aaKnown RBP14.12□□□□□ -0.15
MSH6-215ENST00000622629 L2HGDHQ9H9P8 463 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.12□□□□□ -0.15
MSH6-215ENST00000622629 RABGAP1Q9Y3P9 1069 aa14.12□□□□□ -0.15
MSH6-215ENST00000622629 E9PMD0 336 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 GCFC2P16383 781 aaKnown RBP14.11□□□□□ -0.15
MSH6-215ENST00000622629 HOXA13P31271 388 aaPredicted RBP14.11□□□□□ -0.15
MSH6-215ENST00000622629 HNRNPH2P55795 449 aaKnown RBP14.11□□□□□ -0.15
MSH6-215ENST00000622629 GPSM2P81274 684 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 CCDC50Q8IVM0 306 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 MLXIPQ9HAP2 919 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 ANAPC4Q9UJX5 808 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 TFR2Q9UP52 801 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 USP17L10C9JJH3 530 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 HARSP12081 509 aaKnown RBP14.11□□□□□ -0.15
MSH6-215ENST00000622629 GNGT1P63211 74 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 C3orf67Q6ZVT6 689 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 LRRN4CLQ8ND94 238 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 SWAP70Q9UH65 585 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 CLRN2A0PK11 232 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 KRIT1O00522 736 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 LRRC63Q05C16 580 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 DLGAP5Q15398 846 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 PPP1R7Q15435 360 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 GRIPAP1Q4V328 841 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 CEP85LQ5SZL2 805 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 BCAS4Q8TDM0 211 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 CCSER1Q9C0I3 900 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 EPB41L5Q9HCM4 733 aa14.11□□□□□ -0.15
MSH6-215ENST00000622629 UTP11Q9Y3A2 253 aaKnown RBP14.11□□□□□ -0.15
MSH6-215ENST00000622629 AKAP12Q02952 1782 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms