RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 USO1O60763 962 aaKnown RBP14.41□□□□□ -0.1
CHD1L-210ENST00000622533 HOXA7P31268 230 aaPredicted RBP14.41□□□□□ -0.1
CHD1L-210ENST00000622533 AMPD3Q01432 767 aa14.41□□□□□ -0.1
CHD1L-210ENST00000622533 ITIH3Q06033 890 aa14.41□□□□□ -0.1
CHD1L-210ENST00000622533 TBC1D8BQ0IIM8 1120 aa14.41□□□□□ -0.1
CHD1L-210ENST00000622533 COBLL1Q53SF7 1204 aa14.41□□□□□ -0.1
CHD1L-210ENST00000622533 CCDC121Q6ZUS5 278 aa14.41□□□□□ -0.1
CHD1L-210ENST00000622533 TEX11Q8IYF3 940 aa14.41□□□□□ -0.1
CHD1L-210ENST00000622533 P2RX5Q93086 422 aa14.41□□□□□ -0.1
CHD1L-210ENST00000622533 MS4A14Q96JA4 679 aa14.41□□□□□ -0.1
CHD1L-210ENST00000622533 FAM84BQ96KN1 310 aaPredicted RBP14.41□□□□□ -0.1
CHD1L-210ENST00000622533 PCMTD1Q96MG8 357 aaPredicted RBP14.41□□□□□ -0.1
CHD1L-210ENST00000622533 OSBPL9Q96SU4 736 aa14.41□□□□□ -0.1
CHD1L-210ENST00000622533 TCP11L1Q9NUJ3 509 aa14.41□□□□□ -0.1
CHD1L-210ENST00000622533 TPX2Q9ULW0 747 aaKnown RBP14.41□□□□□ -0.1
CHD1L-210ENST00000622533 NUTM2BA6NNL0 878 aaPredicted RBP14.4□□□□□ -0.1
CHD1L-210ENST00000622533 A6NNZ2 444 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 NUTM2EB1AL46 878 aaPredicted RBP14.4□□□□□ -0.1
CHD1L-210ENST00000622533 ADAMTS2O95450 1211 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 GLI1P08151 1106 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 MDH1P40925 334 aaKnown RBP14.4□□□□□ -0.1
CHD1L-210ENST00000622533 SPA17Q15506 151 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 TUBB8Q3ZCM7 444 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 FAM47AQ5JRC9 791 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 C8orf74Q6P047 294 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 FBXO33Q7Z6M2 555 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 TRIM58Q8NG06 486 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 M0R2N6 131 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 PPP1R12AO14974 1030 aaPredicted RBP14.4□□□□□ -0.1
CHD1L-210ENST00000622533 VAV2P52735 878 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 TRADDQ15628 312 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 KCTD19Q17RG1 926 aaPredicted RBP14.4□□□□□ -0.1
CHD1L-210ENST00000622533 CLEC4GQ6UXB4 293 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 FUKQ8N0W3 1084 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 ANKRD13CQ8N6S4 541 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 ERGIC2Q96RQ1 377 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 LZTS2Q9BRK4 669 aa14.4□□□□□ -0.1
CHD1L-210ENST00000622533 COL14A1Q05707 1796 aaKnown RBP14.39□□□□□ -0.11
CHD1L-210ENST00000622533 GOLGA6L7A0A1B0GV03 622 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 NMT2O60551 498 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 MECOMQ03112 1051 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 GRM4Q14833 912 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 NAA25Q14CX7 972 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 IQCKQ8N0W5 287 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 PIK3R5Q8WYR1 880 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 CAVIN3Q969G5 261 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 CYFIP2Q96F07 1278 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 FAM205AQ6ZU69 1335 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 RASSF10A6NK89 507 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 PRLRP16471 622 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 RCSD1Q6JBY9 416 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 C6orf89Q6UWU4 347 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 ZSCAN29Q8IWY8 852 aaPredicted RBP14.39□□□□□ -0.11
CHD1L-210ENST00000622533 ZNF384Q8TF68 577 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 CNOT6LQ96LI5 555 aaKnown RBP14.39□□□□□ -0.11
CHD1L-210ENST00000622533 C7orf25Q9BPX7 421 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 PAGR1Q9BTK6 254 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 CDCA7Q9BWT1 371 aaPredicted RBP14.39□□□□□ -0.11
CHD1L-210ENST00000622533 OSBPL7Q9BZF2 842 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 EPB41L5Q9HCM4 733 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 PCDHA6Q9UN73 950 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 MINPP1Q9UNW1 487 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 PCDHA8Q9Y5H6 950 aa14.39□□□□□ -0.11
CHD1L-210ENST00000622533 TACC1O75410 805 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 FAM107AO95990 144 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 MTIF2P46199 727 aaKnown RBP14.38□□□□□ -0.11
CHD1L-210ENST00000622533 GUCY2DQ02846 1103 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 ORC2Q13416 577 aaPredicted RBP14.38□□□□□ -0.11
CHD1L-210ENST00000622533 QPCTQ16769 361 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 CNNM4Q6P4Q7 775 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 ZNF572Q7Z3I7 529 aaPredicted RBP14.38□□□□□ -0.11
CHD1L-210ENST00000622533 PNMA1Q8ND90 353 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 DUSP9Q99956 384 aaKnown RBP14.38□□□□□ -0.11
CHD1L-210ENST00000622533 NOC4LQ9BVI4 516 aaKnown RBP14.38□□□□□ -0.11
CHD1L-210ENST00000622533 MAST2Q6P0Q8 1798 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 FGFR1OPO95684 399 aaKnown RBP14.38□□□□□ -0.11
CHD1L-210ENST00000622533 MAATS1Q7Z4T9 603 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 CCDC42Q96M95 316 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 EZRP15311 586 aaKnown RBP14.38□□□□□ -0.11
CHD1L-210ENST00000622533 HNRNPH3P31942 346 aaKnown RBP14.38□□□□□ -0.11
CHD1L-210ENST00000622533 MRPL12P52815 198 aaKnown RBP14.38□□□□□ -0.11
CHD1L-210ENST00000622533 SF3A3Q12874 501 aaKnown RBP eCLIP14.38□□□□□ -0.111e-23■■■■□ 23.4
CHD1L-210ENST00000622533 SPTY2D1Q68D10 685 aaPredicted RBP14.38□□□□□ -0.11
CHD1L-210ENST00000622533 CABP7Q86V35 215 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 DOT1LQ8TEK3 1739 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 TBC1D31Q96DN5 1066 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 BARHL2Q9NY43 387 aa14.38□□□□□ -0.11
CHD1L-210ENST00000622533 ABCB11O95342 1321 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 KIAA1551Q9HCM1 1747 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 PDE6BP35913 854 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 RNASE9P60153 205 aaKnown RBP14.37□□□□□ -0.11
CHD1L-210ENST00000622533 PDE4DQ08499 809 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 PLCB4Q15147 1175 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 ACCSLQ4AC99 568 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 TYW1BQ6NUM6 668 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 KRT25Q7Z3Z0 450 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 GPKOWQ92917 476 aaPredicted RBP eCLIP14.37□□□□□ -0.114e-6■■□□□ 14.2
CHD1L-210ENST00000622533 SGSM3Q96HU1 749 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 ATP6V1G3Q96LB4 118 aa14.37□□□□□ -0.11
CHD1L-210ENST00000622533 TRIM6Q9C030 488 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms