RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 ENAHQ8N8S7 591 aaPredicted RBP19.6■□□□□ 0.73
TARDBP-225ENST00000621715 IL27Q8NEV9 243 aa19.6■□□□□ 0.73
TARDBP-225ENST00000621715 RILPL2Q969X0 211 aa19.6■□□□□ 0.73
TARDBP-225ENST00000621715 EPHX3Q9H6B9 360 aa19.6■□□□□ 0.73
TARDBP-225ENST00000621715 HDAC6Q9UBN7 1215 aa19.6■□□□□ 0.73
TARDBP-225ENST00000621715 DDX41Q9UJV9 622 aaKnown RBP19.6■□□□□ 0.73
TARDBP-225ENST00000621715 NOD1Q9Y239 953 aa19.6■□□□□ 0.73
TARDBP-225ENST00000621715 B4E1Z4 1266 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 BAIAP3O94812 1187 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 GH1P01241 217 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 ZNF286BP0CG31 522 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 PCP11498 1178 aaKnown RBP19.59■□□□□ 0.73
TARDBP-225ENST00000621715 CKBP12277 381 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 EIF2AK2P19525 551 aaKnown RBP19.59■□□□□ 0.73
TARDBP-225ENST00000621715 TRIM71Q2Q1W2 868 aaKnown RBP19.59■□□□□ 0.73
TARDBP-225ENST00000621715 LRRC8DQ7L1W4 858 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 AFAP1L1Q8TED9 768 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 GDPD5Q8WTR4 605 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 ANKS1AQ92625 1134 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 ESR2Q92731 530 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 RMDN3Q96TC7 470 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 TSPYL2Q9H2G4 693 aaPredicted RBP19.59■□□□□ 0.73
TARDBP-225ENST00000621715 JMJD4Q9H9V9 463 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 GTF2IRD1Q9UHL9 959 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 PNMA2Q9UL42 364 aa19.59■□□□□ 0.73
TARDBP-225ENST00000621715 SIP14410 1827 aa19.58■□□□□ 0.73
TARDBP-225ENST00000621715 ABCB11O95342 1321 aa19.58■□□□□ 0.73
TARDBP-225ENST00000621715 GTPBP6O43824 516 aaPredicted RBP19.58■□□□□ 0.72
TARDBP-225ENST00000621715 SORBS3O60504 671 aa19.58■□□□□ 0.72
TARDBP-225ENST00000621715 PPP1R11O60927 126 aaPredicted RBP19.58■□□□□ 0.72
TARDBP-225ENST00000621715 RGS20O76081 388 aa19.58■□□□□ 0.72
TARDBP-225ENST00000621715 CXCL10P02778 98 aa19.58■□□□□ 0.72
TARDBP-225ENST00000621715 SELPP16109 830 aa19.58■□□□□ 0.72
TARDBP-225ENST00000621715 RBL2Q08999 1139 aa19.58■□□□□ 0.72
TARDBP-225ENST00000621715 SLC35G1Q2M3R5 365 aa19.58■□□□□ 0.72
TARDBP-225ENST00000621715 STAG2Q8N3U4 1231 aa19.58■□□□□ 0.72
TARDBP-225ENST00000621715 CAGE1Q8TC20 777 aa19.58■□□□□ 0.72
TARDBP-225ENST00000621715 NSUN6Q8TEA1 469 aaKnown RBP19.58■□□□□ 0.72
TARDBP-225ENST00000621715 MPHOSPH6Q99547 160 aaKnown RBP19.58■□□□□ 0.72
TARDBP-225ENST00000621715 IL25Q9H293 177 aa19.58■□□□□ 0.72
TARDBP-225ENST00000621715 ZSWIM5Q9P217 1185 aa19.58■□□□□ 0.72
TARDBP-225ENST00000621715 HAS3O00219 553 aa19.57■□□□□ 0.72
TARDBP-225ENST00000621715 PSEN2P49810 448 aa19.57■□□□□ 0.72
TARDBP-225ENST00000621715 ALG1Q9BT22 464 aa19.57■□□□□ 0.72
TARDBP-225ENST00000621715 RNF41Q9H4P4 317 aaPredicted RBP19.57■□□□□ 0.72
TARDBP-225ENST00000621715 VAT1LQ9HCJ6 419 aa19.57■□□□□ 0.72
TARDBP-225ENST00000621715 PXMP2Q9NR77 195 aa19.57■□□□□ 0.72
TARDBP-225ENST00000621715 BAZ2BQ9UIF8 2168 aaKnown RBP19.57■□□□□ 0.72
TARDBP-225ENST00000621715 C5orf42Q9H799 3197 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 ZNF213O14771 459 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 F2P00734 622 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 STXBP2Q15833 593 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 B4GALNT3Q6L9W6 998 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 CWC27Q6UX04 472 aaKnown RBP19.56■□□□□ 0.72
TARDBP-225ENST00000621715 TICAM2Q86XR7 235 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 PLEKHM2Q8IWE5 1019 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 IL31RAQ8NI17 732 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 EMID1Q96A84 441 aaPredicted RBP19.56■□□□□ 0.72
TARDBP-225ENST00000621715 ZFP91Q96JP5 570 aaPredicted RBP19.56■□□□□ 0.72
TARDBP-225ENST00000621715 ZSCAN10Q96SZ4 725 aaPredicted RBP19.56■□□□□ 0.72
TARDBP-225ENST00000621715 OSBPL7Q9BZF2 842 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 SUGCTQ9HAC7 445 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 CD320Q9NPF0 282 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 ZBTB47Q9UFB7 747 aaPredicted RBP19.56■□□□□ 0.72
TARDBP-225ENST00000621715 MTUS1Q9ULD2 1270 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 MICAL3Q7RTP6 2002 aa19.56■□□□□ 0.72
TARDBP-225ENST00000621715 KIF28PB7ZC32 967 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 NR3C2P08235 984 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 CASTP20810 708 aaKnown RBP19.55■□□□□ 0.72
TARDBP-225ENST00000621715 KCNJ6P48051 423 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 MKRN4PQ13434 485 aaPredicted RBP19.55■□□□□ 0.72
TARDBP-225ENST00000621715 MFSD10Q14728 455 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 DGKDQ16760 1214 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 AAK1Q2M2I8 961 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 ZNF618Q5T7W0 954 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 ARHGEF16Q5VV41 709 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 CNKSR3Q6P9H4 555 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 FBXO11Q86XK2 927 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 GPKOWQ92917 476 aaPredicted RBP eCLIP19.55■□□□□ 0.72
TARDBP-225ENST00000621715 IWS1Q96ST2 819 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 BCAS3Q9H6U6 928 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 KAT14Q9H8E8 782 aa19.55■□□□□ 0.72
TARDBP-225ENST00000621715 DOCK5Q9H7D0 1870 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 B4DLN1 442 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 GJB5O95377 273 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 CFBP00751 764 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 IGHDP01880 384 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 PLA2G5P39877 138 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 HSD17B4P51659 736 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 MRPL12P52815 198 aaKnown RBP19.54■□□□□ 0.72
TARDBP-225ENST00000621715 SP2Q02086 613 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 KIAA0753Q2KHM9 967 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 ASPRV1Q53RT3 343 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 FAM117BQ6P1L5 589 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.54■□□□□ 0.721e-28■■■■■ 32.6
TARDBP-225ENST00000621715 SMC5Q8IY18 1101 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 PPTC7Q8NI37 304 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 HLA-CQ95604 372 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 C11orf16Q9NQ32 467 aa19.54■□□□□ 0.72
TARDBP-225ENST00000621715 COG5Q9UP83 839 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms