RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PPME1Q9Y570 386 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 RNMTO43148 476 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 SERPINB4P48594 390 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 IGBP1P78318 339 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 DCTPP1Q9H773 170 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 SAP30BPQ9UHR5 308 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 PI4KAP2A4QPH2 592 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 CARSP49589 748 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 TCP10Q12799 353 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 C20orf194Q5TEA3 1177 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 KIRREL3Q8IZU9 778 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 PI4KAP1Q8N8J0 262 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 ING2Q9H160 280 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 TRIM45Q9H8W5 580 aaPredicted RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 CDV3Q9UKY7 258 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 JCADQ9P266 1359 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 MEI4A8MW99 385 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 TMED10P49755 219 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 PDE6CP51160 858 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 CUL3Q13618 768 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 FBXO2Q9UK22 296 aaPredicted RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 ZNF215Q9UL58 517 aaPredicted RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 DNM3Q9UQ16 869 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 PCDHB9Q9Y5E1 797 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 MAP3K1Q13233 1512 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 PRR29P0C7W0 189 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 STAT2P52630 851 aa7.76□□□□□ -1.17
COLCA1-205ENST00000620864 EIF4A2Q14240 407 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 ENOX1Q8TC92 643 aaKnown RBP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.76□□□□□ -1.17
COLCA1-205ENST00000620864 ARHGEF35A5YM69 484 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 POLR2DO15514 142 aaKnown RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 E2F5Q15329 346 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 CHST3Q7LGC8 479 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 ICA1LQ8NDH6 482 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 LARP6Q9BRS8 491 aaKnown RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 TRIM8Q9BZR9 551 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 DNAJC17Q9NVM6 304 aaKnown RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 RIMBP3CA6NJZ7 1639 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 RIMBP3BA6NNM3 1639 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 RIMBP3Q9UFD9 1639 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 IQANK1A0A1B0GTG1 560 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 RAB14P61106 215 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 GRAMD1AQ96CP6 724 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 ANLNQ9NQW6 1124 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 SUCLA2Q9P2R7 463 aaPredicted RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 PNMA2Q9UL42 364 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 PYGMP11217 842 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 DDX5P17844 614 aaKnown RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 NR1D1P20393 614 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 MSH2P43246 934 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 ADALQ6DHV7 355 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 WDR75Q8IWA0 830 aaKnown RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 TUBGCP3Q96CW5 907 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 ZNF212Q9UDV6 495 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 STK17AQ9UEE5 414 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 ANAPC5Q9UJX4 755 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 SLC13A4Q9UKG4 626 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 SCAF11Q99590 1463 aaKnown RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 BFSP1Q12934 665 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 RARS2Q5T160 578 aaKnown RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 DNAJC10Q8IXB1 793 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 SNX29Q8TEQ0 813 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 FAM193BQ96PV7 902 aaPredicted RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 STX18Q9P2W9 335 aaKnown RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 ADCY3O60266 1144 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 HIBCHQ6NVY1 386 aaPredicted RBP7.75□□□□□ -1.17
COLCA1-205ENST00000620864 KLC3Q6P597 504 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 BBS5Q8N3I7 341 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 ZNF280CQ8ND82 737 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 CNBD2Q96M20 576 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 NEUROG2Q9H2A3 272 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 PIM2Q9P1W9 311 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 ASXL1Q8IXJ9 1541 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 STXBP3O00186 592 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 RCN2Q14257 317 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 GRAMD1BQ3KR37 738 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 TTC38Q5R3I4 469 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 BEND3Q5T5X7 828 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 SLC30A9Q6PML9 568 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 RRAGAQ7L523 313 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 MAML3Q96JK9 1138 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 CUEDC2Q9H467 287 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 ABCA5Q8WWZ7 1642 aa7.75□□□□□ -1.17
COLCA1-205ENST00000620864 GOLGA8TH3BQL2 631 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 GOLGA8HP0CJ92 632 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 SCG2P13521 617 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 BASP1P80723 227 aaKnown RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 KIF23Q02241 960 aaPredicted RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 CAV1Q03135 178 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 CYLC2Q14093 348 aaPredicted RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 IQCB1Q15051 598 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 GALNT17Q6IS24 598 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 TYW1BQ6NUM6 668 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 DDX28Q9NUL7 540 aaKnown RBP7.74□□□□□ -1.17
COLCA1-205ENST00000620864 ABCF3Q9NUQ8 709 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 PCDHB13Q9Y5F0 798 aa7.74□□□□□ -1.17
COLCA1-205ENST00000620864 KCNJ18B7U540 433 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms