RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ROBO3Q96MS0 1386 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 SSU72P8A0A1W2PR75 194 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 KRT14P02533 472 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 FAM153BP0C7A2 387 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 GRB10Q13322 594 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 FAM153CQ494X1 144 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 CFAP221Q4G0U5 840 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 SV2BQ7L1I2 683 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 NEK8Q86SG6 692 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 POTEDQ86YR6 584 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 IFT20Q8IY31 132 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 GUF1Q8N442 669 aaKnown RBP21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 TFCP2L1Q9NZI6 479 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 FAM153AQ9UHL3 310 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 TSKSQ9UJT2 592 aa21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 ATXN2Q99700 1313 aaKnown RBP21.66■■□□□ 1.06
PDLIM3-212ENST00000620787 NAV1Q8NEY1 1877 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 RBAK-RBAKDNI3L0D1 243 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 NAPAP54920 295 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 CCDC43Q96MW1 224 aaKnown RBP21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 NFU1Q9UMS0 254 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 PVALEFA0A1B0GWK0 134 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 ZSCAN5CA6NGD5 496 aaPredicted RBP21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 ZNF233A6NK53 670 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 FGFR1OPO95684 399 aaKnown RBP21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 GOLGA8HP0CJ92 632 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 INPP5BP32019 993 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 NT5C2P49902 561 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 KCTD16Q68DU8 428 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 KDM7AQ6ZMT4 941 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 TMEM47Q9BQJ4 181 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 EDEM3Q9BZQ6 932 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 CPVLQ9H3G5 476 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 RNF14Q9UBS8 474 aa21.65■■□□□ 1.06
PDLIM3-212ENST00000620787 NDUFAB1O14561 156 aa21.64■■□□□ 1.05
PDLIM3-212ENST00000620787 HIBADHP31937 336 aaKnown RBP21.64■■□□□ 1.05
PDLIM3-212ENST00000620787 ATP1A2P50993 1020 aa21.64■■□□□ 1.05
PDLIM3-212ENST00000620787 LRRC63Q05C16 580 aa21.64■■□□□ 1.05
PDLIM3-212ENST00000620787 TMC4Q7Z404 712 aa21.64■■□□□ 1.05
PDLIM3-212ENST00000620787 PIK3R5Q8WYR1 880 aa21.64■■□□□ 1.05
PDLIM3-212ENST00000620787 PNMA5Q96PV4 448 aa21.64■■□□□ 1.05
PDLIM3-212ENST00000620787 CLSTN1O94985 981 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 HEXIM1O94992 359 aaKnown RBP21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 APBA1Q02410 837 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 KCNMA1Q12791 1236 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 PAK2Q13177 524 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 CFAP58Q5T655 872 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 MREGQ8N565 214 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 LZTS2Q9BRK4 669 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 SPZ1Q9BXG8 430 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 MKNK2Q9HBH9 465 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 LOC102724428A0A0B4J2F2 783 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 ESYT3A0FGR9 886 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 SMCO2A6NFE2 343 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 KLRF2D3W0D1 207 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 TSPY3P0CV98 308 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 TSPY8P0CW00 308 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 SIK1P57059 783 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 FBXW10Q5XX13 1052 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 MCTP2Q6DN12 878 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 KCNV1Q6PIU1 500 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 DYMQ7RTS9 669 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 CACNA2D4Q7Z3S7 1137 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 EPB41L5Q9HCM4 733 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 STK17AQ9UEE5 414 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 JAG2Q9Y219 1238 aa21.63■■□□□ 1.05
PDLIM3-212ENST00000620787 ERCC3P19447 782 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 GUCY2DQ02846 1103 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 EMC10Q5UCC4 262 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 B4GALNT4Q76KP1 1039 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 CD302Q8IX05 232 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 TBCKQ8TEA7 893 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 RNPC3Q96LT9 517 aaKnown RBP21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 ZNF652Q9Y2D9 606 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 COL14A1Q05707 1796 aaKnown RBP21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 ZEB2O60315 1214 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 TLR2O60603 784 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 IRX3P78415 501 aaPredicted RBP21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 TDRD12Q587J7 1177 aaKnown RBP21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 SLC44A5Q8NCS7 719 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 LARP4BQ92615 738 aaKnown RBP21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 C6orf50Q9HD87 102 aa21.62■■□□□ 1.05
PDLIM3-212ENST00000620787 ATAD5Q96QE3 1844 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 PALMO75781 387 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 HNRNPH1P31943 449 aaKnown RBP21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 TXKP42681 527 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 NAP1L1P55209 391 aaKnown RBP21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 SWT1Q5T5J6 900 aaKnown RBP21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 IFT81Q8WYA0 676 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 STX8Q9UNK0 236 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 MYH4Q9Y623 1939 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 NOL4O94818 638 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 LSP1P33241 339 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 ARHGAP27Q6ZUM4 889 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 DZIP1Q86YF9 867 aaKnown RBP21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 CNPY4Q8N129 248 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 GLIS3Q8NEA6 775 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 CASKIN2Q8WXE0 1202 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 MTMR9Q96QG7 549 aa21.61■■□□□ 1.05
PDLIM3-212ENST00000620787 A0A0G2JS52 829 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms