RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 TLR3O15455 904 aaKnown RBP6.42□□□□□ -1.38
CBWD3-215ENST00000619322 TGFB3P10600 412 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 RASA1P20936 1047 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 ADAM17P78536 824 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 PRR20EP86478 221 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 PRR20CP86479 221 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 PRR20DP86480 221 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 PRR20BP86481 221 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 PRR20AP86496 221 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 PPP2R5BQ15173 497 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 LRRC26Q2I0M4 334 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 PRPF38AQ8NAV1 312 aaKnown RBP6.42□□□□□ -1.38
CBWD3-215ENST00000619322 ZKSCAN4Q969J2 545 aaPredicted RBP6.42□□□□□ -1.38
CBWD3-215ENST00000619322 P2RX7Q99572 595 aaKnown RBP6.42□□□□□ -1.38
CBWD3-215ENST00000619322 SLF1Q9BQI6 1058 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 PRR12Q9ULL5 1215 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 ZHX2Q9Y6X8 837 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 MCM3APO60318 1980 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 CLRN2A0PK11 232 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 RB1P06400 928 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 SUPT20HL2P0C7V6 817 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 VARSP26640 1264 aaKnown RBP6.42□□□□□ -1.38
CBWD3-215ENST00000619322 MAGEA10P43363 369 aaPredicted RBP6.42□□□□□ -1.38
CBWD3-215ENST00000619322 SOX10P56693 466 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 RTP1P59025 263 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 UBE3AQ05086 875 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 CERKLQ49MI3 558 aaPredicted RBP6.42□□□□□ -1.38
CBWD3-215ENST00000619322 SMC5Q8IY18 1101 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 HDAC7Q8WUI4 952 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 EAF2Q96CJ1 260 aaPredicted RBP6.42□□□□□ -1.38
CBWD3-215ENST00000619322 CDCA3Q99618 268 aaPredicted RBP6.42□□□□□ -1.38
CBWD3-215ENST00000619322 TINF2Q9BSI4 451 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 ALDH8A1Q9H2A2 487 aaPredicted RBP6.42□□□□□ -1.38
CBWD3-215ENST00000619322 TXNRD2Q9NNW7 524 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 CABP5Q9NP86 173 aa6.42□□□□□ -1.38
CBWD3-215ENST00000619322 MYH7BA7E2Y1 1941 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 PNMA6EA0A0J9YXQ4 647 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 SRGAP3O43295 1099 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 TRAK2O60296 914 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 EFEMP2O95967 443 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 PCBP1Q15365 356 aaKnown RBP eCLIP6.41□□□□□ -1.38
CBWD3-215ENST00000619322 TTC39AQ5SRH9 613 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 RNF180Q86T96 592 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 NPLOC4Q8TAT6 608 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 RASGRP4Q8TDF6 673 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 LZTS2Q9BRK4 669 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 GZF1Q9H116 711 aaPredicted RBP6.41□□□□□ -1.38
CBWD3-215ENST00000619322 MTIF3Q9H2K0 278 aaKnown RBP6.41□□□□□ -1.38
CBWD3-215ENST00000619322 ALG2Q9H553 416 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 AAASQ9NRG9 546 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 SCN5AQ14524 2016 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 FOXP2O15409 715 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 FRAT2O75474 233 aaPredicted RBP6.41□□□□□ -1.38
CBWD3-215ENST00000619322 JAG1P78504 1218 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 PTK7Q13308 1070 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 GPATCH4Q5T3I0 446 aaKnown RBP6.41□□□□□ -1.38
CBWD3-215ENST00000619322 TAPT1Q6NXT6 567 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 CTR9Q6PD62 1173 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 SIRT2Q8IXJ6 389 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 CDK15Q96Q40 435 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 MTMR4Q9NYA4 1195 aa6.41□□□□□ -1.38
CBWD3-215ENST00000619322 KBTBD13C9JR72 458 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 FSCN2O14926 492 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 IGHDP01880 384 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 MLLT6P55198 1093 aaPredicted RBP6.4□□□□□ -1.38
CBWD3-215ENST00000619322 WDR4P57081 412 aaKnown RBP6.4□□□□□ -1.38
CBWD3-215ENST00000619322 PTK2Q05397 1052 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 AAK1Q2M2I8 961 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 DUSP28Q4G0W2 176 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 CCDC62Q6P9F0 684 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 RPUSD2Q8IZ73 545 aaKnown RBP6.4□□□□□ -1.38
CBWD3-215ENST00000619322 KCTD17Q8N5Z5 321 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 USP38Q8NB14 1042 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 SNIP1Q8TAD8 396 aaKnown RBP6.4□□□□□ -1.38
CBWD3-215ENST00000619322 CHURC1Q8WUH1 139 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 P2RX5Q93086 422 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 VEZTQ9HBM0 779 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 FLRT1Q9NZU1 646 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 A0A1W2PQ45 241 aaPredicted RBP6.4□□□□□ -1.38
CBWD3-215ENST00000619322 A0A1W2PQY0 241 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 FAM177BA6PVY3 158 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 MAFGO15525 162 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 ZIC2O95409 532 aaPredicted RBP6.4□□□□□ -1.38
CBWD3-215ENST00000619322 SNAI1O95863 264 aaPredicted RBP6.4□□□□□ -1.38
CBWD3-215ENST00000619322 TTLL1O95922 423 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 RLBP1P12271 317 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 FCER1AP12319 257 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 RFX1P22670 979 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 ERVK-21P61565 698 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 IRX3P78415 501 aaPredicted RBP6.4□□□□□ -1.38
CBWD3-215ENST00000619322 GPATCH3Q96I76 525 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 KATNAL1Q9BW62 490 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 GLT8D2Q9H1C3 349 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 PAG1Q9NWQ8 432 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 KIAA1024Q9UPX6 916 aa6.4□□□□□ -1.38
CBWD3-215ENST00000619322 GSG1L2A8MUP6 293 aa6.4□□□□□ -1.39
CBWD3-215ENST00000619322 RNF113AO15541 343 aaKnown RBP6.4□□□□□ -1.39
CBWD3-215ENST00000619322 LILRA1O75019 489 aa6.4□□□□□ -1.39
CBWD3-215ENST00000619322 ATF7P17544 494 aaPredicted RBP6.4□□□□□ -1.39
CBWD3-215ENST00000619322 PLA2G5P39877 138 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms