RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 SNX11Q9Y5W9 270 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 CTSWP56202 376 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 GPSM2P81274 684 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 PPP2R3AQ06190 1150 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 KRTAP19-4Q3LI73 84 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 EPHA10Q5JZY3 1008 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 MAP1SQ66K74 1059 aaPredicted RBP9.47□□□□□ -0.89
CBWD1-228ENST00000619157 LCNL1Q6ZST4 164 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 FAM214BQ7L5A3 538 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 UBE3DQ7Z6J8 389 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 C1QL4Q86Z23 238 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 SULF2Q8IWU5 870 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 LRRC56Q8IYG6 542 aaPredicted RBP9.47□□□□□ -0.89
CBWD1-228ENST00000619157 BHLHE22Q8NFJ8 381 aaPredicted RBP9.47□□□□□ -0.89
CBWD1-228ENST00000619157 TTLL11Q8NHH1 800 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 GPR101Q96P66 508 aaPredicted RBP9.47□□□□□ -0.89
CBWD1-228ENST00000619157 PLA2G12BQ9BX93 195 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 GREM2Q9H772 168 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 TMEM39AQ9NV64 488 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 CSADQ9Y600 493 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 KDM2BQ8NHM5 1336 aa9.47□□□□□ -0.89
CBWD1-228ENST00000619157 CACNA1FO60840 1977 aa9.46□□□□□ -0.89
CBWD1-228ENST00000619157 RPS8P62241 208 aaKnown RBP9.46□□□□□ -0.9
CBWD1-228ENST00000619157 FOXO4P98177 505 aa9.46□□□□□ -0.9
CBWD1-228ENST00000619157 NEXNQ0ZGT2 675 aa9.46□□□□□ -0.9
CBWD1-228ENST00000619157 ZC3H12AQ5D1E8 599 aaKnown RBP9.46□□□□□ -0.9
CBWD1-228ENST00000619157 PRR23BQ6ZRT6 265 aa9.46□□□□□ -0.9
CBWD1-228ENST00000619157 RNF214Q8ND24 703 aa9.46□□□□□ -0.9
CBWD1-228ENST00000619157 KAZALD1Q96I82 304 aa9.46□□□□□ -0.9
CBWD1-228ENST00000619157 POLLQ9UGP5 575 aa9.46□□□□□ -0.9
CBWD1-228ENST00000619157 RTL9Q8NET4 1388 aa9.46□□□□□ -0.9
CBWD1-228ENST00000619157 YDJCA8MPS7 323 aa9.45□□□□□ -0.9
CBWD1-228ENST00000619157 PPIP5K2O43314 1243 aa9.45□□□□□ -0.9
CBWD1-228ENST00000619157 TOMM70O94826 608 aa9.45□□□□□ -0.9
CBWD1-228ENST00000619157 TSPAN15O95858 294 aa9.45□□□□□ -0.9
CBWD1-228ENST00000619157 CSF1RP07333 972 aa9.45□□□□□ -0.9
CBWD1-228ENST00000619157 KIAA2012Q0VF49 1180 aa9.45□□□□□ -0.9
CBWD1-228ENST00000619157 CCDC152Q4G0S7 254 aa9.45□□□□□ -0.9
CBWD1-228ENST00000619157 PI16Q6UXB8 463 aa9.45□□□□□ -0.9
CBWD1-228ENST00000619157 DPP8Q6V1X1 898 aaPredicted RBP9.45□□□□□ -0.9
CBWD1-228ENST00000619157 SYDE1Q6ZW31 735 aaPredicted RBP9.45□□□□□ -0.9
CBWD1-228ENST00000619157 GPBAR1Q8TDU6 330 aa9.45□□□□□ -0.9
CBWD1-228ENST00000619157 GTF2IRD1Q9UHL9 959 aa9.45□□□□□ -0.9
CBWD1-228ENST00000619157 ERVK-24P63145 666 aa9.44□□□□□ -0.9
CBWD1-228ENST00000619157 NKPD1Q17RQ9 610 aa9.44□□□□□ -0.9
CBWD1-228ENST00000619157 PPM1JQ5JR12 505 aa9.44□□□□□ -0.9
CBWD1-228ENST00000619157 MPZL3Q6UWV2 235 aa9.44□□□□□ -0.9
CBWD1-228ENST00000619157 TMC4Q7Z404 712 aa9.44□□□□□ -0.9
CBWD1-228ENST00000619157 TBC1D16Q8TBP0 767 aa9.44□□□□□ -0.9
CBWD1-228ENST00000619157 DNAJC25Q9H1X3 360 aa9.44□□□□□ -0.9
CBWD1-228ENST00000619157 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
CBWD1-228ENST00000619157 PODXL2Q9NZ53 605 aa9.44□□□□□ -0.9
CBWD1-228ENST00000619157 ADAMTSL1Q8N6G6 1762 aa9.44□□□□□ -0.9
CBWD1-228ENST00000619157 PCNTO95613 3336 aa9.43□□□□□ -0.9
CBWD1-228ENST00000619157 UTYO14607 1347 aa9.43□□□□□ -0.9
CBWD1-228ENST00000619157 GRM8O00222 908 aa9.43□□□□□ -0.9
CBWD1-228ENST00000619157 NBPF7P0C2Y1 421 aaPredicted RBP9.43□□□□□ -0.9
CBWD1-228ENST00000619157 VEGFAP15692 232 aaPredicted RBP9.43□□□□□ -0.9
CBWD1-228ENST00000619157 RARSP54136 660 aaKnown RBP9.43□□□□□ -0.9
CBWD1-228ENST00000619157 CXCL9Q07325 125 aa9.43□□□□□ -0.9
CBWD1-228ENST00000619157 ALDH1L2Q3SY69 923 aa9.43□□□□□ -0.9
CBWD1-228ENST00000619157 SLC4A10Q6U841 1118 aa9.43□□□□□ -0.9
CBWD1-228ENST00000619157 SUCLG2Q96I99 432 aa9.43□□□□□ -0.9
CBWD1-228ENST00000619157 KCNQ5Q9NR82 932 aa9.43□□□□□ -0.9
CBWD1-228ENST00000619157 TNNQ9UQP3 1299 aa9.43□□□□□ -0.9
CBWD1-228ENST00000619157 MYH3P11055 1940 aa9.43□□□□□ -0.9
CBWD1-228ENST00000619157 PTPRCP08575 1304 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 PITPNM2Q9BZ72 1349 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 SHTN1A0MZ66 631 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 ALDH1L1O75891 902 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 HSPA6P17066 643 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 AFMP43652 599 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 HTRA3P83110 453 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 GPC2Q8N158 579 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 ZSCAN18Q8TBC5 510 aaPredicted RBP9.42□□□□□ -0.9
CBWD1-228ENST00000619157 JDP2Q8WYK2 163 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 PPP1R16BQ96T49 567 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 SRCIN1Q9C0H9 1055 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 VPS33BQ9H267 617 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 TAF1DQ9H5J8 278 aaPredicted RBP9.42□□□□□ -0.9
CBWD1-228ENST00000619157 CBX8Q9HC52 389 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 SMC4Q9NTJ3 1288 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 MINPP1Q9UNW1 487 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 SPEF2Q9C093 1822 aa9.42□□□□□ -0.9
CBWD1-228ENST00000619157 IRS2Q9Y4H2 1338 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 SNAP23O00161 211 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 RAD17O75943 681 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 IGHA2P01877 340 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 GLI1P08151 1106 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 CT47B1P0C2W7 299 aaPredicted RBP9.41□□□□□ -0.9
CBWD1-228ENST00000619157 ZSCAN22P10073 491 aaPredicted RBP9.41□□□□□ -0.9
CBWD1-228ENST00000619157 HSP90B1P14625 803 aaKnown RBP9.41□□□□□ -0.9
CBWD1-228ENST00000619157 KLRK1P26718 216 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 ARNTP27540 789 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 EPS15P42566 896 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 LILRA6Q6PI73 481 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 LMBR1LQ6UX01 489 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 ANKRD18AQ8IVF6 992 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 NIM1KQ8IY84 436 aa9.41□□□□□ -0.9
CBWD1-228ENST00000619157 ANKRD44Q8N8A2 993 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms