RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 ANKRD40Q6AI12 368 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 TTBK2Q6IQ55 1244 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 PEX26Q7Z412 305 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 SH3RF1Q7Z6J0 888 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 CNKSR1Q969H4 720 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 CCDC113Q9H0I3 377 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 ARHGEF10LQ9HCE6 1279 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 MRFAP1Q9Y605 127 aa6.21□□□□□ -1.41
SYNCRIP-204ENST00000616122 SPATA31A5Q5VU36 1347 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 SPATA31A7Q8IWB4 1347 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 KDM3AQ9Y4C1 1321 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 CAMTA1Q9Y6Y1 1673 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 GOLGA6CA6NDK9 693 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 USP17L10C9JJH3 530 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 HSF2BPO75031 334 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 GOLGA6DP0CG33 693 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 MRPS25P82663 173 aaKnown RBP6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 ARHGAP4P98171 946 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 NT5DC1Q5TFE4 455 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 USP37Q86T82 979 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 C10orf67Q8IYJ2 551 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 TRIM31Q9BZY9 425 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 SH2D4AQ9H788 454 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 GOLGA6AQ9NYA3 693 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 APBA3O96018 575 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 BMP3P12645 472 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 EVX2Q03828 476 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 ZNF543Q08ER8 600 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 NFIAQ12857 509 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 BARGINQ6ZT62 677 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 MAEAQ7L5Y9 396 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 EXOC4Q96A65 974 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 PLVAPQ9BX97 442 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 TSGA10Q9BZW7 698 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 RABEP2Q9H5N1 569 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 NHEJ1Q9H9Q4 299 aaPredicted RBP6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 PANK4Q9NVE7 773 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 BCCIPQ9P287 314 aaKnown RBP eCLIP6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 FAM184BQ9ULE4 1060 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 FAN1Q9Y2M0 1017 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 GH2P01242 217 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 TFRCP02786 760 aaKnown RBP6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 PLA2G4BP0C869 781 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 ABCB4P21439 1286 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 GYS2P54840 703 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 PDIA5Q14554 519 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 SPATA20Q8TB22 786 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 EDEM3Q9BZQ6 932 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 HDAC6Q9UBN7 1215 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 SWAP70Q9UH65 585 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 FLT1P17948 1338 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 CNTNAP4Q9C0A0 1308 aa6.21□□□□□ -1.42
SYNCRIP-204ENST00000616122 MEIS1O00470 390 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 GNA14O95837 355 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 PAK2Q13177 524 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 WDR78Q5VTH9 848 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 MCTP2Q6DN12 878 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 TTI2Q6NXR4 508 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 POTEDQ86YR6 584 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 QTRT2Q9H974 415 aaKnown RBP6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 POTEB3A0JP26 581 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 POTECB2RU33 542 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 EIF3CLB5ME19 914 aaKnown RBP6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 SRGAP2O75044 1071 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 PDE6BP35913 854 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 POTEBQ6S5H4 581 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 MED15Q96RN5 788 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 EIF3CQ99613 913 aaKnown RBP6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 LSM14BQ9BX40 385 aaKnown RBP6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 PCDHA6Q9UN73 950 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 FRMD4BQ9Y2L6 1034 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 PCDHA8Q9Y5H6 950 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 AK9Q5TCS8 1911 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 IFT172Q9UG01 1749 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 WNT7AO00755 349 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 VPS72Q15906 364 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 IFT20Q8IY31 132 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 ST7Q9NRC1 585 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 IL17RBQ9NRM6 502 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 CTTNBP2NLQ9P2B4 639 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 TSKSQ9UJT2 592 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 CAPN11Q9UMQ6 739 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 RIC1Q4ADV7 1423 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 NFAT5O94916 1531 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 MYMKA6NI61 221 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 KCNK3O14649 394 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 BACH1O14867 736 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 PDHBP11177 359 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 GPSM2P81274 684 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 ARHGAP44Q17R89 818 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 GBP6Q6ZN66 633 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 LRRC45Q96CN5 670 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 NWD1Q149M9 1564 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 FAM170AA1A519 330 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 LRRC53A6NM62 1247 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 SRGNP10124 158 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 TNFAIP3P21580 790 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 CYP2J2P51589 502 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 GUCY2DQ02846 1103 aa6.2□□□□□ -1.42
SYNCRIP-204ENST00000616122 PSMD2Q13200 908 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms