RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ZNF341Q9BYN7 854 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 ATP6V0A2Q9Y487 856 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 CAMTA1Q9Y6Y1 1673 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 KRT19P08727 400 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 IQCB1Q15051 598 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 NLRX1Q86UT6 975 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 PAF1Q8N7H5 531 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 ARMCX3Q9UH62 379 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 MAD2L2Q9UI95 211 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 CNTNAP5Q8WYK1 1306 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 PLEKHG2Q9H7P9 1386 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 POTEB3A0JP26 581 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 POTECB2RU33 542 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 FGFR2P21802 821 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 VAV2P52735 878 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 ODR4Q5SWX8 454 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 TTC19Q6DKK2 380 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 POTEBQ6S5H4 581 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 SND1Q7KZF4 910 aaKnown RBP eCLIP9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 TICAM2Q86XR7 235 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 GPR161Q8N6U8 529 aaKnown RBP9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 MAP3K14Q99558 947 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 PHLPP2Q6ZVD8 1323 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 EFCAB8A8MWE9 144 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 MYL7Q01449 175 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 SEPT14Q6ZU15 432 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 TMC4Q7Z404 712 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 PEX26Q7Z412 305 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 FAM76AQ8TAV0 307 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 AFAP1L1Q8TED9 768 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 DDX12PQ92771 950 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 ANKFY1Q9P2R3 1169 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 SEPT9Q9UHD8 586 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 JCADQ9P266 1359 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 BCL9O00512 1426 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 ATP2C1P98194 919 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 PLCB3Q01970 1234 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 CC2D2BQ6DHV5 1058 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 KIFAP3Q92845 792 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 CCDC127Q96BQ5 260 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 CCDC17Q96LX7 622 aa9.83□□□□□ -0.84
PDLIM5-222ENST00000615540 FTCDO95954 541 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 TNNI1P19237 187 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 EEF1GP26641 437 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 RPS6KA1Q15418 735 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 WHAMMP3Q1A5X7 153 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 ARL6IP4Q66PJ3 421 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 ATRIPQ8WXE1 791 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 CUEDC2Q9H467 287 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 EIF4A3P38919 411 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 GBP6Q6ZN66 633 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 ILDR1Q86SU0 546 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 CCDC84Q86UT8 332 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 ZNF526Q8TF50 670 aaPredicted RBP9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 PPP1R16BQ96T49 567 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 MAGEF1Q9HAY2 307 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 POTEFA5A3E0 1075 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 SLIT3O75094 1523 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 POTEIP0CG38 1075 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 PRPHP41219 470 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 LONRF2Q1L5Z9 754 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 CFAP58Q5T655 872 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 NAA35Q5VZE5 725 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 POTEGQ6S5H5 508 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 PTF1AQ7RTS3 328 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 METTL13Q8N6R0 699 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 DHX36Q9H2U1 1008 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 SP8Q8IXZ3 490 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 ABHD10Q9NUJ1 306 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 UTP11Q9Y3A2 253 aaKnown RBP9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 COL4A3BPQ9Y5P4 624 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 RIC1Q4ADV7 1423 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 CNTNAP4Q9C0A0 1308 aa9.82□□□□□ -0.84
PDLIM5-222ENST00000615540 A0A1W2PRG0 241 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 GOLGA8IPA6NC78 632 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 GOLGA8JA6NMD2 632 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 LRRN2O75325 713 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 TAL1P17542 331 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 CCDC155Q8N6L0 562 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 PCDHA13Q9Y5I0 950 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 DCAF8L1A6NGE4 600 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 STXBP3O00186 592 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 KLK7P49862 253 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 EXOC3L4Q17RC7 722 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 CFAP221Q4G0U5 840 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 CCDC93Q567U6 631 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 SLC27A3Q5K4L6 730 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 DCAF4Q8WV16 495 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 VTI1AQ96AJ9 217 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 AS3MTQ9HBK9 375 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 RAVER2Q9HCJ3 691 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 hCG_1984214I3L0E3 225 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 IGBP1P78318 339 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 EHHADHQ08426 723 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 NCBP1Q09161 790 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 DPYDQ12882 1025 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 COASYQ13057 564 aa9.81□□□□□ -0.84
PDLIM5-222ENST00000615540 MKRN3Q13064 507 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms