RNA–Protein interactions for RNA: ENST00000614703.4

SNX9-202, Transcript of sorting nexin 9, humanhuman

TSL 4

Gene SNX9, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-202ENST00000614703 EP400NLQ6ZTU2 488 aa11.34□□□□□ -0.59
SNX9-202ENST00000614703 TMCO2Q7Z6W1 182 aaPredicted RBP11.34□□□□□ -0.59
SNX9-202ENST00000614703 PANK1Q8TE04 598 aa11.34□□□□□ -0.59
SNX9-202ENST00000614703 NSUN3Q9H649 340 aaKnown RBP11.34□□□□□ -0.59
SNX9-202ENST00000614703 GTF2IRD1Q9UHL9 959 aa11.34□□□□□ -0.59
SNX9-202ENST00000614703 WDR19Q8NEZ3 1342 aa11.34□□□□□ -0.59
SNX9-202ENST00000614703 USP34Q70CQ2 3546 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 H3BNC9 293 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 HTRA4P83105 476 aaPredicted RBP11.33□□□□□ -0.6
SNX9-202ENST00000614703 FOXK2Q01167 660 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 GPM6BQ13491 265 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 GPNMBQ14956 572 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 EPC2Q52LR7 807 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 SLC30A10Q6XR72 485 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 SIRT2Q8IXJ6 389 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 MYOCDQ8IZQ8 938 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 RGS22Q8NE09 1264 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
SNX9-202ENST00000614703 AFG1LQ8WV93 481 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 COPS5Q92905 334 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 CHMP4CQ96CF2 233 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 C17orf80Q9BSJ5 609 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 IRF2BPLQ9H1B7 796 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 ZBTB40Q9NUA8 1239 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 MTMR7Q9Y216 660 aa11.33□□□□□ -0.6
SNX9-202ENST00000614703 RALGAPA2Q2PPJ7 1873 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 C5orf42Q9H799 3197 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 M0R2C6 588 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 RANBP6O60518 1105 aaKnown RBP11.32□□□□□ -0.6
SNX9-202ENST00000614703 TOP1P11387 765 aaKnown RBP11.32□□□□□ -0.6
SNX9-202ENST00000614703 COL19A1Q14993 1142 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 HERC4Q5GLZ8 1057 aaPredicted RBP11.32□□□□□ -0.6
SNX9-202ENST00000614703 HFE2Q6ZVN8 426 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 PPP1R13LQ8WUF5 828 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 YME1L1Q96TA2 773 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 LMAN2LQ9H0V9 348 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 CLDND1Q9NY35 253 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 RWDD3Q9Y3V2 267 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 KIAA1217Q5T5P2 1943 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 NLRC5Q86WI3 1866 aa11.32□□□□□ -0.6
SNX9-202ENST00000614703 SLC16A2P36021 539 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 NOVP48745 357 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 PSEN2P49810 448 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 ARHGAP1Q07960 439 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 LAMC2Q13753 1193 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 SMAD2Q15796 467 aaKnown RBP11.31□□□□□ -0.6
SNX9-202ENST00000614703 STXBP2Q15833 593 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 TCEAL5Q5H9L2 206 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 CCDC62Q6P9F0 684 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 BMP8AQ7Z5Y6 402 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 DHX37Q8IY37 1157 aaKnown RBP11.31□□□□□ -0.6
SNX9-202ENST00000614703 TMEM192Q8IY95 271 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 NSUN6Q8TEA1 469 aaKnown RBP11.31□□□□□ -0.6
SNX9-202ENST00000614703 CLEC4DQ8WXI8 215 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 DHX38Q92620 1227 aaKnown RBP11.31□□□□□ -0.6
SNX9-202ENST00000614703 KAT2BQ92831 832 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
SNX9-202ENST00000614703 CTAGE1Q96RT6 745 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 IWS1Q96ST2 819 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 HDAC6Q9UBN7 1215 aa11.31□□□□□ -0.6
SNX9-202ENST00000614703 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.31□□□□□ -0.64e-6■□□□□ 8.7
SNX9-202ENST00000614703 COL4A6Q14031 1691 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 RSPH10B2B2RC85 870 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 ARIH2O95376 493 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 F2P00734 622 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 RB1P06400 928 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 RSPH10BP0C881 870 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 IRS1P35568 1242 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 MFSD10Q14728 455 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 KIAA0753Q2KHM9 967 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 ZNF618Q5T7W0 954 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 TTBK2Q6IQ55 1244 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 SEPT14Q6ZU15 432 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 CHST3Q7LGC8 479 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 FBXO11Q86XK2 927 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 MCF2L2Q86YR7 1114 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 SUGP1Q8IWZ8 645 aaKnown RBP11.3□□□□□ -0.6
SNX9-202ENST00000614703 DBF4BQ8NFT6 615 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 SEPT8Q92599 483 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 EDAQ92838 391 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 PPP2R3CQ969Q6 453 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 ALG1Q9BT22 464 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 GPCPD1Q9NPB8 672 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 ANAPC4Q9UJX5 808 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 ZDBF2Q9HCK1 2354 aa11.3□□□□□ -0.6
SNX9-202ENST00000614703 CFAP54Q96N23 3096 aa11.29□□□□□ -0.6
SNX9-202ENST00000614703 MYH7BA7E2Y1 1941 aa11.29□□□□□ -0.6
SNX9-202ENST00000614703 ORC4O43929 436 aa11.29□□□□□ -0.6
SNX9-202ENST00000614703 NMT2O60551 498 aa11.29□□□□□ -0.6
SNX9-202ENST00000614703 CAND2O75155 1236 aa11.29□□□□□ -0.6
SNX9-202ENST00000614703 SMAD4Q13485 552 aaKnown RBP11.29□□□□□ -0.6
SNX9-202ENST00000614703 LY6KQ17RY6 165 aa11.29□□□□□ -0.6
SNX9-202ENST00000614703 PLEKHG4Q58EX7 1191 aa11.29□□□□□ -0.6
SNX9-202ENST00000614703 GPATCH4Q5T3I0 446 aaKnown RBP11.29□□□□□ -0.6
SNX9-202ENST00000614703 KCNV1Q6PIU1 500 aa11.29□□□□□ -0.6
SNX9-202ENST00000614703 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.29□□□□□ -0.6
SNX9-202ENST00000614703 RPAINQ86UA6 219 aa11.29□□□□□ -0.6
SNX9-202ENST00000614703 PPTC7Q8NI37 304 aa11.29□□□□□ -0.6
SNX9-202ENST00000614703 APBB2Q92870 758 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms