RNA–Protein interactions for RNA: ENST00000612845.4

LTBP4-234, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-234ENST00000612845 HOXA13P31271 388 aaPredicted RBP17.24■□□□□ 0.35
LTBP4-234ENST00000612845 GHRHRQ02643 423 aa17.24■□□□□ 0.35
LTBP4-234ENST00000612845 C8orf34Q49A92 452 aa17.24■□□□□ 0.35
LTBP4-234ENST00000612845 ZNF713Q8N859 430 aaPredicted RBP17.24■□□□□ 0.35
LTBP4-234ENST00000612845 ZNF274Q96GC6 653 aaPredicted RBP17.24■□□□□ 0.35
LTBP4-234ENST00000612845 PSTPIP2Q9H939 334 aa17.24■□□□□ 0.35
LTBP4-234ENST00000612845 PXMP2Q9NR77 195 aa17.24■□□□□ 0.35
LTBP4-234ENST00000612845 RBM47A0AV96 593 aaKnown RBP17.23■□□□□ 0.35
LTBP4-234ENST00000612845 ARVCFO00192 962 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 OPLAHO14841 1288 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 SEC24BO95487 1268 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 RAG1P15918 1043 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 PTGS1P23219 599 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 PDIA3P30101 505 aaKnown RBP17.23■□□□□ 0.35
LTBP4-234ENST00000612845 ADD1P35611 737 aaKnown RBP17.23■□□□□ 0.35
LTBP4-234ENST00000612845 NAPAP54920 295 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 CCT2P78371 535 aaKnown RBP17.23■□□□□ 0.35
LTBP4-234ENST00000612845 FAAP100Q0VG06 881 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 TOB2Q14106 344 aaPredicted RBP17.23■□□□□ 0.35
LTBP4-234ENST00000612845 TTLL4Q14679 1199 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 PPP1R18Q6NYC8 613 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 CXCL17Q6UXB2 119 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 TRIM22Q8IYM9 498 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 SCFD2Q8WU76 684 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 EHMT1Q9H9B1 1298 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 GTF3C3Q9Y5Q9 886 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 NID2Q14112 1375 aa17.23■□□□□ 0.35
LTBP4-234ENST00000612845 TLR3O15455 904 aaKnown RBP17.22■□□□□ 0.35
LTBP4-234ENST00000612845 NR3C2P08235 984 aa17.22■□□□□ 0.35
LTBP4-234ENST00000612845 MYCLP12524 364 aaPredicted RBP17.22■□□□□ 0.35
LTBP4-234ENST00000612845 CCND2P30279 289 aa17.22■□□□□ 0.35
LTBP4-234ENST00000612845 CDK7P50613 346 aa17.22■□□□□ 0.35
LTBP4-234ENST00000612845 EVCP57679 992 aa17.22■□□□□ 0.35
LTBP4-234ENST00000612845 TMEM63BQ5T3F8 832 aa17.22■□□□□ 0.35
LTBP4-234ENST00000612845 GPR153Q6NV75 609 aa17.22■□□□□ 0.35
LTBP4-234ENST00000612845 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
LTBP4-234ENST00000612845 GPKOWQ92917 476 aaPredicted RBP eCLIP17.22■□□□□ 0.35
LTBP4-234ENST00000612845 GLT8D2Q9H1C3 349 aa17.22■□□□□ 0.35
LTBP4-234ENST00000612845 SLKQ9H2G2 1235 aaPredicted RBP17.22■□□□□ 0.35
LTBP4-234ENST00000612845 FAM217BQ9NTX9 383 aaPredicted RBP17.22■□□□□ 0.35
LTBP4-234ENST00000612845 TBX21Q9UL17 535 aa17.22■□□□□ 0.35
LTBP4-234ENST00000612845 BAZ2BQ9UIF8 2168 aaKnown RBP17.22■□□□□ 0.35
LTBP4-234ENST00000612845 SPDYE3A6NKU9 549 aa17.21■□□□□ 0.35
LTBP4-234ENST00000612845 NKRFO15226 690 aaKnown RBP eCLIP17.21■□□□□ 0.35
LTBP4-234ENST00000612845 EIF3JO75822 258 aaKnown RBP17.21■□□□□ 0.35
LTBP4-234ENST00000612845 CPT1AP50416 773 aa17.21■□□□□ 0.35
LTBP4-234ENST00000612845 STK3Q13188 491 aa17.21■□□□□ 0.35
LTBP4-234ENST00000612845 BRDTQ58F21 947 aaPredicted RBP17.21■□□□□ 0.35
LTBP4-234ENST00000612845 SEPT14Q6ZU15 432 aa17.21■□□□□ 0.35
LTBP4-234ENST00000612845 OR6J1Q8NGC5 347 aa17.21■□□□□ 0.35
LTBP4-234ENST00000612845 PDCD2LQ9BRP1 358 aa17.21■□□□□ 0.35
LTBP4-234ENST00000612845 ALDH8A1Q9H2A2 487 aaPredicted RBP17.21■□□□□ 0.35
LTBP4-234ENST00000612845 PIK3CDO00329 1044 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 PRPF3O43395 683 aaKnown RBP17.2■□□□□ 0.34
LTBP4-234ENST00000612845 CDKL5O76039 1030 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 ITGB8P26012 769 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 ADCY7P51828 1080 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 NEK4P51957 841 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 FPGSQ05932 587 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 SSRP1Q08945 709 aaKnown RBP17.2■□□□□ 0.34
LTBP4-234ENST00000612845 FUT2Q10981 343 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 WWC2Q6AWC2 1192 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 TEX2Q8IWB9 1127 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 FAM126BQ8IXS8 530 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 LARP6Q9BRS8 491 aaKnown RBP17.2■□□□□ 0.34
LTBP4-234ENST00000612845 SLC26A6Q9BXS9 759 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 RNF26Q9BY78 433 aaPredicted RBP17.2■□□□□ 0.34
LTBP4-234ENST00000612845 SEZ6LQ9BYH1 1024 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 POLR3EQ9NVU0 708 aa17.2■□□□□ 0.34
LTBP4-234ENST00000612845 TXNP10599 105 aaKnown RBP17.19■□□□□ 0.34
LTBP4-234ENST00000612845 SCG2P13521 617 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 IFNAR1P17181 557 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 ITGA7Q13683 1181 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 PGM5Q15124 567 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 PFKFB3Q16875 520 aaPredicted RBP17.19■□□□□ 0.34
LTBP4-234ENST00000612845 GNPTABQ3T906 1256 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 USP17L6PQ6QN14 398 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 SLC43A3Q8NBI5 491 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 CCDC148Q8NFR7 591 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 IL17RAQ96F46 866 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 C22orf23Q9BZE7 217 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 NCOA5Q9HCD5 579 aaKnown RBP17.19■□□□□ 0.34
LTBP4-234ENST00000612845 BARHL2Q9NY43 387 aa17.19■□□□□ 0.34
LTBP4-234ENST00000612845 SMCO2A6NFE2 343 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 STAM2O75886 525 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 TIMP1P01033 207 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 AK2P54819 239 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 SHHQ15465 462 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 C9orf50Q5SZB4 431 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 KCNV1Q6PIU1 500 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 PHKBQ93100 1093 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 C6orf50Q9HD87 102 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 RIC8AQ9NPQ8 531 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 MRVI1Q9Y6F6 885 aa17.18■□□□□ 0.34
LTBP4-234ENST00000612845 STXBP3O00186 592 aa17.17■□□□□ 0.34
LTBP4-234ENST00000612845 CD4P01730 458 aa17.17■□□□□ 0.34
LTBP4-234ENST00000612845 MYL3P08590 195 aa17.17■□□□□ 0.34
LTBP4-234ENST00000612845 PSMC6P62333 389 aa17.17■□□□□ 0.34
LTBP4-234ENST00000612845 PURAQ00577 322 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms