RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ANKRD40Q6AI12 368 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 PDXDC2PQ6P474 469 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 H2AFVQ71UI9 128 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 TPH2Q8IWU9 490 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 PDE11AQ9HCR9 933 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 SUGT1Q9Y2Z0 365 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 STK24Q9Y6E0 443 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 SHTN1A0MZ66 631 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 F5H6K3 240 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 PLA2G4BP0C869 781 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 PDHBP11177 359 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 KIF11P52732 1056 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 KLRC3Q07444 240 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 CCDC174Q6PII3 467 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 TRIM65Q6PJ69 517 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 NSMFQ6X4W1 530 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 TMEM179Q6ZVK1 233 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 USP37Q86T82 979 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 IFT81Q8WYA0 676 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 TSPYL1Q9H0U9 437 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 ATP6V0A2Q9Y487 856 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 GYS1P13807 737 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 MAATS1Q7Z4T9 603 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 MYCT1Q8N699 235 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 FAM163AQ96GL9 167 aaPredicted RBP7.04□□□□□ -1.28
SNX13-213ENST00000611725 LSM14BQ9BX40 385 aaKnown RBP7.04□□□□□ -1.28
SNX13-213ENST00000611725 JRKLQ9Y4A0 524 aa7.04□□□□□ -1.28
SNX13-213ENST00000611725 OPA1O60313 960 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 ARHGAP4P98171 946 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 TBX2Q13207 712 aaPredicted RBP7.03□□□□□ -1.28
SNX13-213ENST00000611725 TTBK2Q6IQ55 1244 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 FMNL3Q8IVF7 1028 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 SUPT20HQ8NEM7 779 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 ZNF384Q8TF68 577 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 TBC1D5Q92609 795 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 HPS3Q969F9 1004 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 ZCCHC17Q9NP64 241 aaKnown RBP7.03□□□□□ -1.28
SNX13-213ENST00000611725 MAD2L2Q9UI95 211 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 GCNT3O95395 438 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 RNASE9P60153 205 aaKnown RBP7.03□□□□□ -1.28
SNX13-213ENST00000611725 RPS6KA1Q15418 735 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 ASIC2Q16515 512 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 SLC27A3Q5K4L6 730 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 MASTLQ96GX5 879 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 EDEM3Q9BZQ6 932 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 CAPN11Q9UMQ6 739 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 EIF3CLB5ME19 914 aaKnown RBP7.03□□□□□ -1.28
SNX13-213ENST00000611725 CEP104O60308 925 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 GH2P01242 217 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 IVLP07476 585 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 SRGNP10124 158 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 HOXA10P31260 410 aaPredicted RBP7.03□□□□□ -1.28
SNX13-213ENST00000611725 FAM83BQ5T0W9 1011 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 EIF3CQ99613 913 aaKnown RBP7.03□□□□□ -1.28
SNX13-213ENST00000611725 C7orf25Q9BPX7 421 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 SELENOOQ9BVL4 669 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 ABCB6Q9NP58 842 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 FRMD4BQ9Y2L6 1034 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 TOPAZ1Q8N9V7 1692 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 FER1L4A9Z1Z3 1794 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 SETD1AO15047 1707 aaKnown RBP7.03□□□□□ -1.28
SNX13-213ENST00000611725 GOLGA6BA6NDN3 693 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 CALUO43852 315 aaPredicted RBP7.03□□□□□ -1.28
SNX13-213ENST00000611725 NPY5RQ15761 445 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 RAD54LQ92698 747 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 JMJD4Q9H9V9 463 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 RSPH14Q9UHP6 348 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 WNT7AO00755 349 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 CRKP46108 304 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 NFIAQ12857 509 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 TTI2Q6NXR4 508 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 FAM178BQ8IXR5 827 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 ARFGAP2Q8N6H7 521 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 TNFRSF25Q93038 417 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 MED4Q9NPJ6 270 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 STK32BQ9NY57 414 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 PLAGL2Q9UPG8 496 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 RABGAP1Q9Y3P9 1069 aa7.03□□□□□ -1.28
SNX13-213ENST00000611725 POTEB3A0JP26 581 aa7.02□□□□□ -1.28
SNX13-213ENST00000611725 LRRC53A6NM62 1247 aa7.02□□□□□ -1.28
SNX13-213ENST00000611725 POTECB2RU33 542 aa7.02□□□□□ -1.28
SNX13-213ENST00000611725 BUB1O43683 1085 aa7.02□□□□□ -1.28
SNX13-213ENST00000611725 HSF2BPO75031 334 aa7.02□□□□□ -1.28
SNX13-213ENST00000611725 EEF2P13639 858 aaKnown RBP7.02□□□□□ -1.28
SNX13-213ENST00000611725 STAT1P42224 750 aa7.02□□□□□ -1.28
SNX13-213ENST00000611725 RASSF7Q02833 373 aa7.02□□□□□ -1.28
SNX13-213ENST00000611725 EXOC3L4Q17RC7 722 aa7.02□□□□□ -1.28
SNX13-213ENST00000611725 POTEBQ6S5H4 581 aa7.02□□□□□ -1.28
SNX13-213ENST00000611725 HHIPL2Q6UWX4 724 aa7.02□□□□□ -1.28
SNX13-213ENST00000611725 CTNNBL1Q8WYA6 563 aaPredicted RBP7.02□□□□□ -1.28
SNX13-213ENST00000611725 RGPD1P0DJD0 1748 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 MYMKA6NI61 221 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 GCOM1H8Y6P7 765 aaPredicted RBP7.02□□□□□ -1.29
SNX13-213ENST00000611725 KIAA0754O94854 1291 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 POLR2MP0CAP2 368 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 EHHADHQ08426 723 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 IFFO1Q0D2I5 559 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 GBP6Q6ZN66 633 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 PROM2Q8N271 834 aa7.02□□□□□ -1.29
SNX13-213ENST00000611725 CEP63Q96MT8 703 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms