RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 TSG101Q99816 390 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 EDEM3Q9BZQ6 932 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 SEMA6BQ9H3T3 888 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 COL2A1P02458 1487 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-224ENST00000610907 EIF3CLB5ME19 914 aaKnown RBP11.62□□□□□ -0.55
PABPC1-224ENST00000610907 TBX3O15119 743 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 ZRANB2O95218 330 aaKnown RBP eCLIP11.62□□□□□ -0.55
PABPC1-224ENST00000610907 IPO7O95373 1038 aaKnown RBP11.62□□□□□ -0.55
PABPC1-224ENST00000610907 EEF2P13639 858 aaKnown RBP11.62□□□□□ -0.55
PABPC1-224ENST00000610907 HNRNPH3P31942 346 aaKnown RBP11.62□□□□□ -0.55
PABPC1-224ENST00000610907 MAN2A1Q16706 1144 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 UBE2SQ16763 222 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 QRICH1Q2TAL8 776 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 WDR59Q6PJI9 974 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 KCTD1Q719H9 257 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 C2CD5Q86YS7 1000 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 CLEC10AQ8IUN9 316 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 SLC35F6Q8N357 371 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 KCTD17Q8N5Z5 321 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 DDX12PQ92771 950 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 CNKSR1Q969H4 720 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 EIF3CQ99613 913 aaKnown RBP11.62□□□□□ -0.55
PABPC1-224ENST00000610907 CHP1Q99653 195 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 SLF1Q9BQI6 1058 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 IRX2Q9BZI1 471 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-224ENST00000610907 DNAJC18Q9H819 358 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 DBNDD1Q9H9R9 158 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 SLC39A2Q9NP94 309 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 ZNF446Q9NWS9 450 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 FAM198AQ9UFP1 575 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 PCDHA1Q9Y5I3 950 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 ATRNL1Q5VV63 1379 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 COL11A2P13942 1736 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-224ENST00000610907 POTEMA6NI47 508 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 PSMD14O00487 310 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 ECE2O60344 883 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 APBA3O96018 575 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 ZSCAN20P17040 1043 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-224ENST00000610907 RXRBP28702 533 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 SLC16A2P36021 539 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 CHMP4BP1P59074 171 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 BRD3Q15059 726 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 GRIPAP1Q4V328 841 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 VWA3BQ502W6 1294 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 KIAA0825Q8IV33 1275 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 ZFPM1Q8IX07 1006 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 SUPT20HQ8NEM7 779 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 AMNQ9BXJ7 453 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 NDST4Q9H3R1 872 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 KCNMB3Q9NPA1 279 aa11.62□□□□□ -0.55
PABPC1-224ENST00000610907 CCDC151A5D8V7 595 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 DDTLA6NHG4 134 aaPredicted RBP11.61□□□□□ -0.55
PABPC1-224ENST00000610907 RASSF10A6NK89 507 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 KRT86O43790 486 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 GNA14O95837 355 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 MMP14P50281 582 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 RBM5P52756 815 aaKnown RBP eCLIP11.61□□□□□ -0.552e-12■■■■□ 23.8
PABPC1-224ENST00000610907 ICA1Q05084 483 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 CDC37Q16543 378 aaPredicted RBP11.61□□□□□ -0.55
PABPC1-224ENST00000610907 ABCB5Q2M3G0 1257 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 Q4G0T1 1027 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 BTNL9Q6UXG8 535 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 DYMQ7RTS9 669 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 CCDC65Q8IXS2 484 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 MYOCDQ8IZQ8 938 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 DNAJC19Q96DA6 116 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 CEP63Q96MT8 703 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 NUDT12Q9BQG2 462 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 ANO3Q9BYT9 981 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 PLAGL2Q9UPG8 496 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 REXO2Q9Y3B8 237 aaKnown RBP11.61□□□□□ -0.55
PABPC1-224ENST00000610907 PITPNM2Q9BZ72 1349 aa11.61□□□□□ -0.55
PABPC1-224ENST00000610907 F5H6K3 240 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 IDEP14735 1019 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 FKBP3Q00688 224 aaKnown RBP11.6□□□□□ -0.55
PABPC1-224ENST00000610907 KLRC3Q07444 240 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 DMTNQ08495 405 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 TEX35Q5T0J7 233 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 HAUS3Q68CZ6 603 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 SH3BP5LQ7L8J4 393 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 SIAH1Q8IUQ4 282 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 HNRNPLLQ8WVV9 542 aaKnown RBP11.6□□□□□ -0.55
PABPC1-224ENST00000610907 CRYGNQ8WXF5 182 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 PCMTD1Q96MG8 357 aaPredicted RBP11.6□□□□□ -0.55
PABPC1-224ENST00000610907 FAM20AQ96MK3 541 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 TSGA10Q9BZW7 698 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 NUCKS1Q9H1E3 243 aaKnown RBP11.6□□□□□ -0.55
PABPC1-224ENST00000610907 NHEJ1Q9H9Q4 299 aaPredicted RBP11.6□□□□□ -0.55
PABPC1-224ENST00000610907 ARFGAP3Q9NP61 516 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 PANK4Q9NVE7 773 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 FHOD1Q9Y613 1164 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 SIPA1L1O43166 1804 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 MYH7BA7E2Y1 1941 aa11.6□□□□□ -0.55
PABPC1-224ENST00000610907 MEIS2O14770 477 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 PNMA6AP0CW24 399 aaPredicted RBP11.59□□□□□ -0.55
PABPC1-224ENST00000610907 MARSP56192 900 aaKnown RBP11.59□□□□□ -0.55
PABPC1-224ENST00000610907 AMPD2Q01433 879 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 TCP10Q12799 353 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 COASYQ13057 564 aa11.59□□□□□ -0.55
PABPC1-224ENST00000610907 ZCWPW2Q504Y3 356 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms