RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TUBGCP2Q9BSJ2 902 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 LRRC27Q9C0I9 530 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 L2HGDHQ9H9P8 463 aa15.21■□□□□ 0.03
NEK3-205ENST00000610828 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.21■□□□□ 0.03
NEK3-205ENST00000610828 V9GYY5 206 aaPredicted RBP15.21■□□□□ 0.03
NEK3-205ENST00000610828 CYP3A7-CYP3A51PA0A087WV96 503 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 B4DLN1 442 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 SSBP05455 408 aaKnown RBP eCLIP15.2■□□□□ 0.02
NEK3-205ENST00000610828 CYP3A7P24462 503 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 KRT9P35527 623 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 STAT2P52630 851 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 COBLL1Q53SF7 1204 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 PRR16Q569H4 304 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 BTNL9Q6UXG8 535 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 CNOT6LQ96LI5 555 aaKnown RBP15.2■□□□□ 0.02
NEK3-205ENST00000610828 TMEM39BQ9GZU3 492 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 NT5C3AQ9H0P0 336 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 PRR12Q9ULL5 1215 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 KDM3AQ9Y4C1 1321 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 CNTNAP1P78357 1384 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 UTRNP46939 3433 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 FANCGO15287 622 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 HOXA13P31271 388 aaPredicted RBP15.2■□□□□ 0.02
NEK3-205ENST00000610828 GNG11P61952 73 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 FAM114A1Q8IWE2 563 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 NIM1KQ8IY84 436 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 SLFN12Q8IYM2 578 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 ZNF507Q8TCN5 953 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 ERO1AQ96HE7 468 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 MRPL44Q9H9J2 332 aaKnown RBP15.2■□□□□ 0.02
NEK3-205ENST00000610828 ZBTB21Q9ULJ3 1066 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 KIAA1024Q9UPX6 916 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 ADGRG1Q9Y653 693 aa15.2■□□□□ 0.02
NEK3-205ENST00000610828 STAT3P40763 770 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 MTIF2P46199 727 aaKnown RBP15.19■□□□□ 0.02
NEK3-205ENST00000610828 KIAA1755Q5JYT7 1200 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 MCTP2Q6DN12 878 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 MIGA2Q7L4E1 593 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 PDCL2Q8N4E4 241 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 CRYGNQ8WXF5 182 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 GOPCQ9HD26 462 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 ZNRF3Q9ULT6 936 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 A0A1W2PQC6 194 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 POTEB3A0JP26 581 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 POTECB2RU33 542 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 E9PMD0 336 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 URI1O94763 535 aaPredicted RBP15.19■□□□□ 0.02
NEK3-205ENST00000610828 FOSP01100 380 aaPredicted RBP15.19■□□□□ 0.02
NEK3-205ENST00000610828 DNM2P50570 870 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 FAM83BQ5T0W9 1011 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 CENPPQ6IPU0 288 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 POTEBQ6S5H4 581 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 MOXD1Q6UVY6 613 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 TMTC1Q8IUR5 882 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 MBOAT7Q96N66 472 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 LZTFL1Q9NQ48 299 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.19■□□□□ 0.02
NEK3-205ENST00000610828 SYNPO2Q9UMS6 1093 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 TMX2Q9Y320 296 aa15.19■□□□□ 0.02
NEK3-205ENST00000610828 TTC26A0AVF1 554 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 OPLAHO14841 1288 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 ZYXQ15942 572 aaKnown RBP15.18■□□□□ 0.02
NEK3-205ENST00000610828 HYIQ5T013 277 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 WDR24Q96S15 920 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 BMP2KQ9NSY1 1161 aaPredicted RBP15.18■□□□□ 0.02
NEK3-205ENST00000610828 FAM86B1E9PN63 330 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 FAM86B2P0C5J1 330 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 FECHP22830 423 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 CASQ1P31415 396 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 SREBF1P36956 1147 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 ERVK-24P63145 666 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 TBC1D8BQ0IIM8 1120 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 CYP26C1Q6V0L0 522 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 GUF1Q8N442 669 aaKnown RBP15.18■□□□□ 0.02
NEK3-205ENST00000610828 ETNPPLQ8TBG4 499 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 DNAJC19Q96DA6 116 aa15.18■□□□□ 0.02
NEK3-205ENST00000610828 NOC4LQ9BVI4 516 aaKnown RBP15.18■□□□□ 0.02
NEK3-205ENST00000610828 LUC7L2Q9Y383 392 aaKnown RBP15.18■□□□□ 0.02
NEK3-205ENST00000610828 PSMD2Q13200 908 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 LRRC41Q15345 812 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 SAMD1Q6SPF0 538 aaPredicted RBP15.17■□□□□ 0.02
NEK3-205ENST00000610828 GLIS3Q8NEA6 775 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 AGBL3Q8NEM8 1001 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 A0A0U1RQJ8 604 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 PLA2G4BP0C869 781 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 MMP14P50281 582 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 CXCL9Q07325 125 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 EHHADHQ08426 723 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 COASYQ13057 564 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 Q4G0T1 1027 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 HAUS3Q68CZ6 603 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 NCAPH2Q6IBW4 605 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 CCDC174Q6PII3 467 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 ACRBPQ8NEB7 543 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 SLC16A10Q8TF71 515 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 ATRIPQ8WXE1 791 aa15.17■□□□□ 0.02
NEK3-205ENST00000610828 KIFC2Q96AC6 838 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms