RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 PPFIA3O75145 1194 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 EIF3JO75822 258 aaKnown RBP14.69□□□□□ -0.06
CD9-212ENST00000610354 TXNP10599 105 aaKnown RBP14.69□□□□□ -0.06
CD9-212ENST00000610354 MYCLP12524 364 aaPredicted RBP14.69□□□□□ -0.06
CD9-212ENST00000610354 SYN1P17600 705 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 MRPL12P52815 198 aaKnown RBP14.69□□□□□ -0.06
CD9-212ENST00000610354 ANAPC15P60006 121 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 MRPS9P82933 396 aaKnown RBP14.69□□□□□ -0.06
CD9-212ENST00000610354 PPP2R5BQ15173 497 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 FSCN1Q16658 493 aaKnown RBP14.69□□□□□ -0.06
CD9-212ENST00000610354 UBE2SQ16763 222 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 LY6KQ17RY6 165 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 C1orf53Q5VUE5 145 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 HEATR3Q7Z4Q2 680 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 MPHOSPH6Q99547 160 aaKnown RBP14.69□□□□□ -0.06
CD9-212ENST00000610354 AP5M1Q9H0R1 490 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 PRO3102Q9H379 93 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 ATP11BQ9Y2G3 1177 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 GRIN2DO15399 1336 aa14.69□□□□□ -0.06
CD9-212ENST00000610354 CXCL17Q6UXB2 119 aa14.68□□□□□ -0.06
CD9-212ENST00000610354 PCSK9Q8NBP7 692 aaKnown RBP14.68□□□□□ -0.06
CD9-212ENST00000610354 PHKBQ93100 1093 aa14.68□□□□□ -0.06
CD9-212ENST00000610354 ALDH8A1Q9H2A2 487 aaPredicted RBP14.68□□□□□ -0.06
CD9-212ENST00000610354 PSTPIP2Q9H939 334 aa14.68□□□□□ -0.06
CD9-212ENST00000610354 SPC25Q9HBM1 224 aa14.68□□□□□ -0.06
CD9-212ENST00000610354 DDX41Q9UJV9 622 aaKnown RBP14.68□□□□□ -0.06
CD9-212ENST00000610354 DOCK5Q9H7D0 1870 aa14.68□□□□□ -0.06
CD9-212ENST00000610354 LTBP2Q14767 1821 aa14.68□□□□□ -0.06
CD9-212ENST00000610354 PRPF3O43395 683 aaKnown RBP14.67□□□□□ -0.06
CD9-212ENST00000610354 PRKCSHP14314 528 aaPredicted RBP14.67□□□□□ -0.06
CD9-212ENST00000610354 CDK7P50613 346 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 TLE2Q04725 743 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 ARHGAP1Q07960 439 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 SEMA3FQ13275 785 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 TTLL4Q14679 1199 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 PFKFB3Q16875 520 aaPredicted RBP14.67□□□□□ -0.06
CD9-212ENST00000610354 SH3RF1Q7Z6J0 888 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 OR6J1Q8NGC5 347 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 SMARCC2Q8TAQ2 1214 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 ZNF274Q96GC6 653 aaPredicted RBP14.67□□□□□ -0.06
CD9-212ENST00000610354 BCAS3Q9H6U6 928 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 STARD7Q9NQZ5 370 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 BARHL2Q9NY43 387 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 COLQQ9Y215 455 aaPredicted RBP14.67□□□□□ -0.06
CD9-212ENST00000610354 ELP1O95163 1332 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 SCN10AQ9Y5Y9 1956 aa14.67□□□□□ -0.06
CD9-212ENST00000610354 CCDC196A0A1B0GTZ2 297 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 NKRFO15226 690 aaKnown RBP eCLIP14.66□□□□□ -0.06
CD9-212ENST00000610354 DTNBO60941 627 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 IFNAR1P17181 557 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 CCND2P30279 289 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 NAPAP54920 295 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 SP2Q02086 613 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 RIC8AQ9NPQ8 531 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 TPCN1Q9ULQ1 816 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 TRIOBPQ9H2D6 2365 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 TRIM43BA6NCK2 446 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 A6NJR5 290 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 SCG2P13521 617 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 AK2P54819 239 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 PSMC6P62333 389 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 STK3Q13188 491 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 PPP1R18Q6NYC8 613 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 SLC43A3Q8NBI5 491 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 CUL5Q93034 780 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 TRIM43Q96BQ3 446 aaPredicted RBP14.66□□□□□ -0.06
CD9-212ENST00000610354 GLT1D1Q96MS3 346 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 INPP4AQ96PE3 977 aaPredicted RBP14.66□□□□□ -0.06
CD9-212ENST00000610354 GDF15Q99988 308 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 PDLIM7Q9NR12 457 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 TMEM260Q9NX78 707 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 RTEL1Q9NZ71 1219 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 PCDHA6Q9UN73 950 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 PCDHA8Q9Y5H6 950 aa14.66□□□□□ -0.06
CD9-212ENST00000610354 SMCO2A6NFE2 343 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 hCG_1984214I3L0E3 225 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 ARVCFO00192 962 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 LARGE1O95461 756 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 GH1P01241 217 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 ITGB8P26012 769 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 CLK2P49760 499 aaKnown RBP14.65□□□□□ -0.06
CD9-212ENST00000610354 PURAQ00577 322 aaKnown RBP14.65□□□□□ -0.06
CD9-212ENST00000610354 PCNX4Q63HM2 1172 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 ANKRD33Q7Z3H0 272 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 ZNF713Q8N859 430 aaPredicted RBP14.65□□□□□ -0.06
CD9-212ENST00000610354 PPP1R13LQ8WUF5 828 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 AFG1LQ8WV93 481 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 PGBD1Q96JS3 809 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 KIF2CQ99661 725 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 SLC26A6Q9BXS9 759 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 RNF26Q9BY78 433 aaPredicted RBP14.65□□□□□ -0.06
CD9-212ENST00000610354 MRVI1Q9Y6F6 885 aa14.65□□□□□ -0.06
CD9-212ENST00000610354 A0A0U1RQG5 324 aaPredicted RBP14.64□□□□□ -0.07
CD9-212ENST00000610354 SPATA31C2B4DYI2 1134 aa14.64□□□□□ -0.07
CD9-212ENST00000610354 SORBS3O60504 671 aa14.64□□□□□ -0.07
CD9-212ENST00000610354 PQBP1O60828 265 aaKnown RBP14.64□□□□□ -0.07
CD9-212ENST00000610354 MYL3P08590 195 aa14.64□□□□□ -0.07
CD9-212ENST00000610354 UBA1P22314 1058 aaKnown RBP14.64□□□□□ -0.07
CD9-212ENST00000610354 ICAM3P32942 547 aa14.64□□□□□ -0.07
CD9-212ENST00000610354 MAGEA10P43363 369 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms