RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 CDK7P50613 346 aa14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 TLE2Q04725 743 aa14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 PKN1Q16512 942 aa14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 UBE2SQ16763 222 aa14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 SMARCC2Q8TAQ2 1214 aa14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 CUL5Q93034 780 aa14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 ZNF274Q96GC6 653 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 ZFP91Q96JP5 570 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 GLT1D1Q96MS3 346 aa14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 NCOA5Q9HCD5 579 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 BARHL2Q9NY43 387 aa14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 DDX41Q9UJV9 622 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 COLQQ9Y215 455 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-207ENST00000606676 LAMA2P24043 3122 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 A6NJR5 290 aa14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 PRPF3O43395 683 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 IFNAR1P17181 557 aa14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 CCND2P30279 289 aa14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 CCT2P78371 535 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 ARHGAP1Q07960 439 aa14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 PFKFB3Q16875 520 aaPredicted RBP14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 PPP1R18Q6NYC8 613 aa14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 CHRDL2Q6WN34 429 aa14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 ANKRD33Q7Z3H0 272 aa14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 OR6J1Q8NGC5 347 aa14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 PHKBQ93100 1093 aa14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 GDF15Q99988 308 aa14.72□□□□□ -0.05
SHROOM1-207ENST00000606676 GRIN2DO15399 1336 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 hCG_1984214I3L0E3 225 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 ARVCFO00192 962 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 ZEB2O60315 1214 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 PPFIA3O75145 1194 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 SCG2P13521 617 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 CPT1AP50416 773 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 NAPAP54920 295 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 SP2Q02086 613 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 ZNF713Q8N859 430 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 SLC43A3Q8NBI5 491 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 VTI1AQ96AJ9 217 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 RIC8AQ9NPQ8 531 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 PDLIM7Q9NR12 457 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 MRVI1Q9Y6F6 885 aa14.71□□□□□ -0.05
SHROOM1-207ENST00000606676 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 TRIM43BA6NCK2 446 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 SMCO2A6NFE2 343 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 ADAMTS3O15072 1205 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 PQBP1O60828 265 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 STAM2O75886 525 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 CABYRO75952 493 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 GH1P01241 217 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 MAGEA10P43363 369 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 PURAQ00577 322 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 FAAP100Q0VG06 881 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 PCNX4Q63HM2 1172 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 SH3RF1Q7Z6J0 888 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 AFG1LQ8WV93 481 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 EMID1Q96A84 441 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 TRIM43Q96BQ3 446 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 TOX2Q96NM4 488 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 INPP4AQ96PE3 977 aaPredicted RBP14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 RTEL1Q9NZ71 1219 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 TPCN1Q9ULQ1 816 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 PCDHA6Q9UN73 950 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 PCDHA8Q9Y5H6 950 aa14.7□□□□□ -0.06
SHROOM1-207ENST00000606676 SZT2Q5T011 3432 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 MYL3P08590 195 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 TGFB3P10600 412 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 ICAM3P32942 547 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 AK2P54819 239 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 PSMC6P62333 389 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 STK3Q13188 491 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 SEMA3FQ13275 785 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 ITGA7Q13683 1181 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 MYSM1Q5VVJ2 828 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 XRRA1Q6P2D8 792 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 KCNV1Q6PIU1 500 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 TEX2Q8IWB9 1127 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 SLC26A6Q9BXS9 759 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 RNF26Q9BY78 433 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 BCAS3Q9H6U6 928 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 POLR3EQ9NVU0 708 aa14.69□□□□□ -0.06
SHROOM1-207ENST00000606676 SPDYE3A6NKU9 549 aa14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 SPATA31C2B4DYI2 1134 aa14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 MMP3P08254 477 aa14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 CLTBP09497 229 aa14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 UBA1P22314 1058 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 ITGB8P26012 769 aa14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 BMP8BP34820 402 aa14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 CLK2P49760 499 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 ADCY7P51828 1080 aa14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 LAMC2Q13753 1193 aa14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 HABP4Q5JVS0 413 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 CELF3Q5SZQ8 465 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 MTG1Q9BT17 334 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 ZMYND12Q9H0C1 365 aa14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 KIAA1217Q5T5P2 1943 aa14.68□□□□□ -0.06
SHROOM1-207ENST00000606676 ESYT2A0FGR8 921 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 DCDC2CA8MYV0 355 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 KIAA0355O15063 1070 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms