RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 FZD1Q9UP38 647 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 PCDHA5Q9Y5H7 936 aa13.84□□□□□ -0.19
NEDD8-MDP1-203ENST00000604306 NFIBO00712 420 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 IKBKBO14920 756 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MARCH6O60337 910 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 TECP42680 631 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SNAPC2Q13487 334 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PRKG1Q13976 671 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MORC3Q14149 939 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 KCNB1Q14721 858 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 TMEM119Q4V9L6 283 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CEP55Q53EZ4 464 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 NAALADL2Q58DX5 795 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RNF207Q6ZRF8 634 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 ERMNQ8TAM6 284 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 OPTNQ96CV9 577 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 OTUD5Q96G74 571 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PDLIM2Q96JY6 352 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MMTAG2Q9BU76 263 aaKnown RBP13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 ACAD9Q9H845 621 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CBX8Q9HC52 389 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RNF146Q9NTX7 359 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PFASO15067 1338 aa13.83□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PLXNA1Q9UIW2 1896 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 FAM86B1E9PN63 330 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MEIS1O00470 390 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 FAM86B2P0C5J1 330 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 ZNF76P36508 570 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 STAT3P40763 770 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PPP1R2P41236 205 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SPIRE1Q08AE8 756 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PPP2R5CQ13362 524 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 DGKZQ13574 1117 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 KARSQ15046 597 aaKnown RBP13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 IQCB1Q15051 598 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PRR16Q569H4 304 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SNRNP48Q6IEG0 339 aaKnown RBP13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 FCHSD1Q86WN1 690 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RIOX2Q8IUF8 465 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CPXCR1Q8N123 301 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RASSF8Q8NHQ8 419 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SYTL5Q8TDW5 730 aaPredicted RBP13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SLC5A5Q92911 643 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RIT2Q99578 217 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 WDR11Q9BZH6 1224 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 DNAJC25Q9H1X3 360 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PNMA3Q9UL41 463 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CLEC11AQ9Y240 323 aa13.82□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PLXNB2O15031 1838 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 ZNF236Q9UL36 1845 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SMTNL1A8MU46 457 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MAFGO15525 162 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SLC25A27O95847 323 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 ZBTB48P10074 688 aaPredicted RBP13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PLCG1P19174 1290 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 OSBPP22059 807 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RPS6P62753 249 aaKnown RBP13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 IRX3P78415 501 aaPredicted RBP13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MOGSQ13724 837 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PWP2Q15269 919 aaKnown RBP13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 DPCR1Q3MIW9 517 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MUM1L1Q5H9M0 696 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SARM1Q6SZW1 724 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 DNERQ8NFT8 737 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 NEK9Q8TD19 979 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CDK5RAP3Q96JB5 506 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MXRA8Q9BRK3 442 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MAN1B1Q9UKM7 699 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MYH11P35749 1972 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 UTRNP46939 3433 aa13.81□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 GOLGA6L19H0YKK7 550 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MSH4O15457 936 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 RPA1P27694 616 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 ERCC5P28715 1186 aaPredicted RBP13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 TPM4P67936 248 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 GRB10Q13322 594 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 COBLL1Q53SF7 1204 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 GADL1Q6ZQY3 521 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 C11orf57Q6ZUT1 292 aaPredicted RBP13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PLA2G4DQ86XP0 818 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 C2orf69Q8N8R5 385 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SNX29Q8TEQ0 813 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 TBC1D5Q92609 795 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 CCDC47Q96A33 483 aaKnown RBP13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 SLC10A4Q96EP9 437 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 IWS1Q96ST2 819 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 C7orf25Q9BPX7 421 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 POLR3CQ9BUI4 534 aaPredicted RBP13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 GBA2Q9HCG7 927 aaPredicted RBP13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PXMP2Q9NR77 195 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 VAV3Q9UKW4 847 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 UBIAD1Q9Y5Z9 338 aa13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 MYH9P35579 1960 aaKnown RBP13.8□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 ARID2Q68CP9 1835 aa13.79□□□□□ -0.2
NEDD8-MDP1-203ENST00000604306 PVALEFA0A1B0GWK0 134 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms