RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 CXCL17Q6UXB2 119 aa27.34■■□□□ 1.97
SSX2IP-209ENST00000603677 TCEANC2Q96MN5 208 aa27.34■■□□□ 1.97
SSX2IP-209ENST00000603677 UBE2OQ9C0C9 1292 aaKnown RBP27.34■■□□□ 1.97
SSX2IP-209ENST00000603677 DDX41Q9UJV9 622 aaKnown RBP27.34■■□□□ 1.97
SSX2IP-209ENST00000603677 MEIS2O14770 477 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 PQBP1O60828 265 aaKnown RBP27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 METAP2P50579 478 aaKnown RBP eCLIP27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 ANAPC15P60006 121 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 PURAQ00577 322 aaKnown RBP27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 FAAP100Q0VG06 881 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 FUT2Q10981 343 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 ITGA7Q13683 1181 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 LAMC2Q13753 1193 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 SEPT14Q6ZU15 432 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 TDHQ8IZJ6 230 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 BRF1Q92994 677 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 MTG1Q9BT17 334 aaPredicted RBP27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 CYP46A1Q9Y6A2 500 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 CNTNAP5Q8WYK1 1306 aa27.33■■□□□ 1.97
SSX2IP-209ENST00000603677 IRX5P78411 483 aaPredicted RBP27.32■■□□□ 1.96
SSX2IP-209ENST00000603677 FCHSD1Q86WN1 690 aa27.32■■□□□ 1.96
SSX2IP-209ENST00000603677 PIBF1Q8WXW3 757 aa27.32■■□□□ 1.96
SSX2IP-209ENST00000603677 TMEM39AQ9NV64 488 aa27.32■■□□□ 1.96
SSX2IP-209ENST00000603677 MRVI1Q9Y6F6 885 aa27.32■■□□□ 1.96
SSX2IP-209ENST00000603677 ARIH2O95376 493 aa27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 ICAM3P32942 547 aa27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 PTPN11Q06124 597 aaPredicted RBP27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 TMEM63BQ5T3F8 832 aa27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 PCNX4Q63HM2 1172 aa27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 FAM126BQ8IXS8 530 aa27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 CMTR1Q8N1G2 835 aaKnown RBP27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 EHMT1Q9H9B1 1298 aa27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 PRDM5Q9NQX1 630 aaPredicted RBP27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 FAM217BQ9NTX9 383 aaPredicted RBP27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 LTBP2Q14767 1821 aa27.31■■□□□ 1.96
SSX2IP-209ENST00000603677 CD4P01730 458 aa27.3■■□□□ 1.96
SSX2IP-209ENST00000603677 SUPT20HL2P0C7V6 817 aa27.3■■□□□ 1.96
SSX2IP-209ENST00000603677 MYCLP12524 364 aaPredicted RBP27.3■■□□□ 1.96
SSX2IP-209ENST00000603677 RAG1P15918 1043 aa27.3■■□□□ 1.96
SSX2IP-209ENST00000603677 FXR1P51114 621 aaKnown RBP eCLIP27.3■■□□□ 1.96
SSX2IP-209ENST00000603677 ARHGAP1Q07960 439 aa27.3■■□□□ 1.96
SSX2IP-209ENST00000603677 LRIT3Q3SXY7 679 aa27.3■■□□□ 1.96
SSX2IP-209ENST00000603677 CCDC82Q8N4S0 544 aa27.3■■□□□ 1.96
SSX2IP-209ENST00000603677 TRIM43BA6NCK2 446 aa27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 FOSP01100 380 aaPredicted RBP27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 MDM2Q00987 491 aaPredicted RBP27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 APOBRQ0VD83 1088 aa27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 LY6KQ17RY6 165 aa27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 MCTP2Q6DN12 878 aa27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 NFRKBQ6P4R8 1299 aa27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 PPTC7Q8NI37 304 aa27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 TRIM43Q96BQ3 446 aaPredicted RBP27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 INPP4AQ96PE3 977 aaPredicted RBP27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 TBX21Q9UL17 535 aa27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 V9GY48 417 aaPredicted RBP27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 SCN10AQ9Y5Y9 1956 aa27.29■■□□□ 1.96
SSX2IP-209ENST00000603677 RGS20O76081 388 aa27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 SLC34A2O95436 690 aa27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 TIMP1P01033 207 aa27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 DGKDQ16760 1214 aa27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 GPR153Q6NV75 609 aa27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 USP17L6PQ6QN14 398 aa27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 HEATR3Q7Z4Q2 680 aa27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 RAB11FIP4Q86YS3 637 aa27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 DHX37Q8IY37 1157 aaKnown RBP27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 CCDC12Q8WUD4 166 aaPredicted RBP27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 ZNF274Q96GC6 653 aaPredicted RBP27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 CDHR1Q96JP9 859 aa27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 BARHL2Q9NY43 387 aa27.28■■□□□ 1.96
SSX2IP-209ENST00000603677 SPDYE3A6NKU9 549 aa27.27■■□□□ 1.96
SSX2IP-209ENST00000603677 MAFGO15525 162 aa27.27■■□□□ 1.96
SSX2IP-209ENST00000603677 PPFIA4O75335 1185 aa27.27■■□□□ 1.96
SSX2IP-209ENST00000603677 MYL3P08590 195 aa27.27■■□□□ 1.96
SSX2IP-209ENST00000603677 CDC27P30260 824 aa27.27■■□□□ 1.96
SSX2IP-209ENST00000603677 SH3RF1Q7Z6J0 888 aa27.27■■□□□ 1.96
SSX2IP-209ENST00000603677 GIMAP8Q8ND71 665 aaPredicted RBP27.27■■□□□ 1.96
SSX2IP-209ENST00000603677 IL17RAQ96F46 866 aa27.27■■□□□ 1.96
SSX2IP-209ENST00000603677 SENP7Q9BQF6 1050 aa27.27■■□□□ 1.96
SSX2IP-209ENST00000603677 RIC8AQ9NPQ8 531 aa27.27■■□□□ 1.96
SSX2IP-209ENST00000603677 GRIN2DO15399 1336 aa27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 FIBPO43427 364 aa27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 MMP3P08254 477 aa27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 HOXD8P13378 290 aaPredicted RBP27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 CPA1P15085 419 aa27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 MRPS9P82933 396 aaKnown RBP27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 NEDD9Q14511 834 aa27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 PFKFB3Q16875 520 aaPredicted RBP27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 CELF3Q5SZQ8 465 aaKnown RBP27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 MYSM1Q5VVJ2 828 aa27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 NLRX1Q86UT6 975 aa27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 COPS5Q92905 334 aa27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 KATNAL1Q9BW62 490 aa27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 ALDH8A1Q9H2A2 487 aaPredicted RBP27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 NAP1L2Q9ULW6 460 aaPredicted RBP27.26■■□□□ 1.95
SSX2IP-209ENST00000603677 PRPF3O43395 683 aaKnown RBP27.25■■□□□ 1.95
SSX2IP-209ENST00000603677 ADD1P35611 737 aaKnown RBP27.25■■□□□ 1.95
SSX2IP-209ENST00000603677 NAPAP54920 295 aa27.25■■□□□ 1.95
SSX2IP-209ENST00000603677 WWC2Q6AWC2 1192 aa27.25■■□□□ 1.95
SSX2IP-209ENST00000603677 FAM177A1Q8N128 213 aaPredicted RBP27.25■■□□□ 1.95
SSX2IP-209ENST00000603677 IL31RAQ8NI17 732 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms