RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 COQ7Q99807 217 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 NT5C3AQ9H0P0 336 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 FBXO2Q9UK22 296 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 PACSIN2Q9UNF0 486 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 ORC6Q9Y5N6 252 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 DLATP10515 647 aaKnown RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 ERFP50548 548 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 GUCY1A3Q02108 690 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 TRIM56Q9BRZ2 755 aaKnown RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 SSH2Q76I76 1423 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 KRT75O95678 551 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 C1orf146Q5VVC0 180 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 EDC3Q96F86 508 aaKnown RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 SPATA17Q96L03 361 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 YWHAEP62258 255 aaKnown RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 PRKG1Q13976 671 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 PLCB4Q15147 1175 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 LLGL1Q15334 1064 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 SLFNL1Q499Z3 407 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 PARP10Q53GL7 1025 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 TMEM154Q6P9G4 183 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 ARL10Q8N8L6 244 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 NRBF2Q96F24 287 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 CEP19Q96LK0 163 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 C1orf112Q9NSG2 853 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 MTMR6Q9Y217 621 aa9.43□□□□□ -0.9
CSMD1-216ENST00000602557 EPN1Q9Y6I3 576 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-216ENST00000602557 MMEP08473 750 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 GLG1Q92896 1179 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 SLC52A2Q9HAB3 445 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 PAX7P23759 505 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 POMGNT1Q8WZA1 660 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 RAPGEF5Q92565 580 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 OLFM3Q96PB7 478 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 MED10Q9BTT4 135 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 ANKFY1Q9P2R3 1169 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 DBNLQ9UJU6 430 aaKnown RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 PALD1Q9ULE6 856 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 TRAPPC8Q9Y2L5 1435 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 RPN1P04843 607 aaKnown RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 MYOCDQ8IZQ8 938 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 ATP7AQ04656 1500 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 HMGB1P1B2RPK0 211 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 NDUFA8P51970 172 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 OCA2Q04671 838 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 ADALQ6DHV7 355 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 DPP8Q6V1X1 898 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 LMNAP02545 664 aaKnown RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 TFAP4Q01664 338 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 BTKQ06187 659 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 RBL2Q08999 1139 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 ARHGEF10O15013 1369 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 ADAMTS12P58397 1594 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 MCF2LO15068 1137 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 SKAP2O75563 359 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 IL13P35225 146 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 PSMD7P51665 324 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 DMP1Q13316 513 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 MFSD14BQ5SR56 506 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 HAUS8Q9BT25 410 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 ARMCX3Q9UH62 379 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 DDX25Q9UHL0 483 aaKnown RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 PASKQ96RG2 1323 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 SRGAP2O75044 1071 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 SERPINB3P29508 390 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 HNRNPH1P31943 449 aaKnown RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 PLTPP55058 493 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 PTH1RQ03431 593 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 PALM3A6NDB9 673 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 RAP1GDS1P52306 607 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 DPCR1Q3MIW9 517 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 KIAA0825Q8IV33 1275 aa9.42□□□□□ -0.9
CSMD1-216ENST00000602557 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-216ENST00000602557 A0A0G2JND7 137 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 ZBED4O75132 1171 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 TCP1P17987 556 aaKnown RBP9.41□□□□□ -0.9
CSMD1-216ENST00000602557 TCP11X2Q5H9J9 407 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 PANK4Q9NVE7 773 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 TTC4O95801 387 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 SLFN14P0C7P3 912 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 TRPC1P48995 793 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 PPP2R5BQ15173 497 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 CHMP2BQ9UQN3 213 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 TRIP13Q15645 432 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-216ENST00000602557 HP1BP3Q5SSJ5 553 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-216ENST00000602557 BICRAQ9NZM4 1560 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 SYNJ2BP-COX16A0A087WUM0 186 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 NEURL1BA8MQ27 555 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 CHL1O00533 1208 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 PDE6CP51160 858 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 CLIC6Q96NY7 704 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 SLC39A2Q9NP94 309 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 COX16Q9P0S2 106 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 WARS2Q9UGM6 360 aaKnown RBP9.41□□□□□ -0.9
CSMD1-216ENST00000602557 CAPN11Q9UMQ6 739 aa9.41□□□□□ -0.9
CSMD1-216ENST00000602557 MFSD4BQ5TF39 518 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms