RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 ST13P5Q8NFI4 369 aaPredicted RBP6.27□□□□□ -1.41
VRK3-222ENST00000601324 ENOX1Q8TC92 643 aaKnown RBP6.27□□□□□ -1.41
VRK3-222ENST00000601324 SYTL5Q8TDW5 730 aaPredicted RBP6.27□□□□□ -1.41
VRK3-222ENST00000601324 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
VRK3-222ENST00000601324 SRPK1Q96SB4 655 aaKnown RBP6.27□□□□□ -1.41
VRK3-222ENST00000601324 APBA2Q99767 749 aa6.27□□□□□ -1.41
VRK3-222ENST00000601324 HDAC8Q9BY41 377 aa6.27□□□□□ -1.41
VRK3-222ENST00000601324 EPN3Q9H201 632 aa6.27□□□□□ -1.41
VRK3-222ENST00000601324 ZSWIM4Q9H7M6 989 aa6.27□□□□□ -1.41
VRK3-222ENST00000601324 SEMA3GQ9NS98 782 aa6.27□□□□□ -1.41
VRK3-222ENST00000601324 BSDC1Q9NW68 430 aaPredicted RBP6.27□□□□□ -1.41
VRK3-222ENST00000601324 GFOD1Q9NXC2 390 aa6.27□□□□□ -1.41
VRK3-222ENST00000601324 SNTG2Q9NY99 539 aa6.27□□□□□ -1.41
VRK3-222ENST00000601324 FHOD1Q9Y613 1164 aa6.27□□□□□ -1.41
VRK3-222ENST00000601324 TRPM1Q7Z4N2 1603 aa6.27□□□□□ -1.41
VRK3-222ENST00000601324 TOPAZ1Q8N9V7 1692 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 ARHGEF28Q8N1W1 1705 aaKnown RBP6.26□□□□□ -1.41
VRK3-222ENST00000601324 CCDC85CA6NKD9 419 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 PPM1BO75688 479 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 PRAMEF1O95521 474 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 CD97P48960 835 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 ZNF445P59923 1031 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 PRKCQQ04759 706 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 BMS1Q14692 1282 aaKnown RBP6.26□□□□□ -1.41
VRK3-222ENST00000601324 SLC10A6Q3KNW5 377 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 NOL9Q5SY16 702 aaKnown RBP6.26□□□□□ -1.41
VRK3-222ENST00000601324 ADAT2Q7Z6V5 191 aaKnown RBP6.26□□□□□ -1.41
VRK3-222ENST00000601324 TSPYL5Q86VY4 417 aaPredicted RBP6.26□□□□□ -1.41
VRK3-222ENST00000601324 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 ZNF669Q96BR6 464 aaPredicted RBP6.26□□□□□ -1.41
VRK3-222ENST00000601324 HRASLS5Q96KN8 279 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 FGD4Q96M96 766 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 ZSWIM5Q9P217 1185 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 VAV3Q9UKW4 847 aa6.26□□□□□ -1.41
VRK3-222ENST00000601324 ACEP12821 1306 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 WDR17Q8IZU2 1322 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 TNS2Q63HR2 1409 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 TUBGCP6Q96RT7 1819 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 FAM221BA6H8Z2 402 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 KIAA1324LA8MWY0 1029 aaPredicted RBP6.25□□□□□ -1.41
VRK3-222ENST00000601324 MED26O95402 600 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 PRNPP04156 253 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 DTX1Q86Y01 620 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 ZNF655Q8N720 491 aaPredicted RBP6.25□□□□□ -1.41
VRK3-222ENST00000601324 ZNF513Q8N8E2 541 aaPredicted RBP6.25□□□□□ -1.41
VRK3-222ENST00000601324 DAGLBQ8NCG7 672 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 ASB11Q8WXH4 323 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 RCC1LQ96I51 464 aaKnown RBP6.25□□□□□ -1.41
VRK3-222ENST00000601324 DSCC1Q9BVC3 393 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 CHST7Q9NS84 486 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 APEX2Q9UBZ4 518 aa6.25□□□□□ -1.41
VRK3-222ENST00000601324 BRD4O60885 1362 aaPredicted RBP6.25□□□□□ -1.41
VRK3-222ENST00000601324 CICQ96RK0 1608 aaPredicted RBP6.25□□□□□ -1.41
VRK3-222ENST00000601324 PCNTO95613 3336 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 AKAP12Q02952 1782 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 SPINK2P20155 84 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 TPP2P29144 1249 aaPredicted RBP6.24□□□□□ -1.41
VRK3-222ENST00000601324 SSTR4P31391 388 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 IFRD2Q12894 506 aaPredicted RBP6.24□□□□□ -1.41
VRK3-222ENST00000601324 AOC3Q16853 763 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 GAB4Q2WGN9 574 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 SV2CQ496J9 727 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 MTERF2Q49AM1 385 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 TMPRSS7Q7RTY8 843 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 FIBCD1Q8N539 461 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 ADCY4Q8NFM4 1077 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 BRF1Q92994 677 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 UBE2FQ969M7 185 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 MRFAP1L1Q96HT8 127 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 ATP13A1Q9HD20 1204 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 POGKQ9P215 609 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 DIS3Q9Y2L1 958 aaKnown RBP6.24□□□□□ -1.41
VRK3-222ENST00000601324 SUGT1Q9Y2Z0 365 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 ABCC6O95255 1503 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 USP6P35125 1406 aa6.24□□□□□ -1.41
VRK3-222ENST00000601324 BTAF1O14981 1849 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 WDR90Q96KV7 1748 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 TOMM70O94826 608 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 GSNP06396 782 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 POLD1P28340 1107 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 HTRA3P83110 453 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 VSIG10LQ86VR7 867 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 ARHGEF25Q86VW2 580 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 ARHGEF39Q8N4T4 335 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 ZNF526Q8TF50 670 aaPredicted RBP6.23□□□□□ -1.41
VRK3-222ENST00000601324 BCL7CQ8WUZ0 217 aaPredicted RBP6.23□□□□□ -1.41
VRK3-222ENST00000601324 PIF1Q9H611 641 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 NOL6Q9H6R4 1146 aaKnown RBP6.23□□□□□ -1.41
VRK3-222ENST00000601324 CGGBP1Q9UFW8 167 aaPredicted RBP6.23□□□□□ -1.41
VRK3-222ENST00000601324 DUSP13Q9UII6 198 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 MINPP1Q9UNW1 487 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 SLC5A6Q9Y289 635 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 SF3B6Q9Y3B4 125 aaKnown RBP6.23□□□□□ -1.41
VRK3-222ENST00000601324 CD2APQ9Y5K6 639 aa6.23□□□□□ -1.41
VRK3-222ENST00000601324 ITSN1Q15811 1721 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 IQCA1LA6NCM1 817 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 WASH4PA8MWX3 477 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 AGRPO00253 132 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 MEIS1O00470 390 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 CTSKP43235 329 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms