RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 LRSAM1Q6UWE0 723 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 TNFRSF25Q93038 417 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 TINF2Q9BSI4 451 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-211ENST00000600927 GPCPD1Q9NPB8 672 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 A1CFQ9NQ94 594 aaKnown RBP13.14□□□□□ -0.31
ZNF548-211ENST00000600927 VPS54Q9P1Q0 977 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 KCNJ14Q9UNX9 436 aa13.14□□□□□ -0.31
ZNF548-211ENST00000600927 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-211ENST00000600927 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 PDE4DIPQ5VU43 2346 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 FAM237AA0A1B0GTK4 181 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 MSCO60682 206 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 CUTAO60888 179 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 GOLGA8HP0CJ92 632 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 TAL1P17542 331 aaPredicted RBP13.13□□□□□ -0.31
ZNF548-211ENST00000600927 CMA1P23946 247 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 MRE11P49959 708 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 ORC2Q13416 577 aaPredicted RBP13.13□□□□□ -0.31
ZNF548-211ENST00000600927 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 MCTP2Q6DN12 878 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 ELOA2Q8IYF1 753 aaPredicted RBP13.13□□□□□ -0.31
ZNF548-211ENST00000600927 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 FAM133AQ8N9E0 248 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
ZNF548-211ENST00000600927 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 C6orf50Q9HD87 102 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 DDX20Q9UHI6 824 aaKnown RBP13.13□□□□□ -0.31
ZNF548-211ENST00000600927 PNMA2Q9UL42 364 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 CCPG1Q9ULG6 757 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 PCDHA7Q9UN72 937 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 CLIC4Q9Y696 253 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 MYH6P13533 1939 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 MYH15Q9Y2K3 1946 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 ASTN1O14525 1302 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 PFASO15067 1338 aa13.13□□□□□ -0.31
ZNF548-211ENST00000600927 M0R2N6 131 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 STXBP3O00186 592 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 SEPT4O43236 478 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 TFRCP02786 760 aaKnown RBP13.12□□□□□ -0.31
ZNF548-211ENST00000600927 ZNF865P0CJ78 1059 aaPredicted RBP13.12□□□□□ -0.31
ZNF548-211ENST00000600927 COL6A1P12109 1028 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 ME1P48163 572 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 ANKRD35Q8N283 1001 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 DIS3LQ8TF46 1054 aaKnown RBP13.12□□□□□ -0.31
ZNF548-211ENST00000600927 CLEC4DQ8WXI8 215 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 KATNBL1Q9H079 304 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 CPVLQ9H3G5 476 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 HOMER2Q9NSB8 354 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 CYP39A1Q9NYL5 469 aa13.12□□□□□ -0.31
ZNF548-211ENST00000600927 ZBTB5O15062 677 aa13.11□□□□□ -0.31
ZNF548-211ENST00000600927 SNAI1O95863 264 aaPredicted RBP13.11□□□□□ -0.31
ZNF548-211ENST00000600927 ALAS1P13196 640 aa13.11□□□□□ -0.31
ZNF548-211ENST00000600927 TOB1P50616 345 aaPredicted RBP13.11□□□□□ -0.31
ZNF548-211ENST00000600927 FAM160A1Q05DH4 1040 aa13.11□□□□□ -0.31
ZNF548-211ENST00000600927 NR5A1Q13285 461 aa13.11□□□□□ -0.31
ZNF548-211ENST00000600927 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
ZNF548-211ENST00000600927 AXDND1Q5T1B0 1012 aaPredicted RBP13.11□□□□□ -0.31
ZNF548-211ENST00000600927 WWC2Q6AWC2 1192 aa13.11□□□□□ -0.31
ZNF548-211ENST00000600927 RBM43Q6ZSC3 357 aaKnown RBP13.11□□□□□ -0.31
ZNF548-211ENST00000600927 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
ZNF548-211ENST00000600927 ENGASEQ8NFI3 743 aa13.11□□□□□ -0.31
ZNF548-211ENST00000600927 MRPS27Q92552 414 aaKnown RBP13.11□□□□□ -0.31
ZNF548-211ENST00000600927 TIGD1Q96MW7 591 aa13.11□□□□□ -0.31
ZNF548-211ENST00000600927 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
ZNF548-211ENST00000600927 JMJD4Q9H9V9 463 aa13.11□□□□□ -0.31
ZNF548-211ENST00000600927 SRPRBQ9Y5M8 271 aaKnown RBP13.11□□□□□ -0.31
ZNF548-211ENST00000600927 SMCHD1A6NHR9 2005 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 ALPK3Q96L96 1907 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 SOWAHBA6NEL2 793 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 NFIBO00712 420 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 CNTN2Q02246 1040 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 CEBPZQ03701 1054 aaKnown RBP13.1□□□□□ -0.31
ZNF548-211ENST00000600927 PRAMEF19Q5SWL8 479 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 PRPF38BQ5VTL8 546 aaKnown RBP13.1□□□□□ -0.31
ZNF548-211ENST00000600927 ARL6IP4Q66PJ3 421 aaKnown RBP13.1□□□□□ -0.31
ZNF548-211ENST00000600927 KRT25Q7Z3Z0 450 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
ZNF548-211ENST00000600927 OXER1Q8TDS5 423 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 MORC4Q8TE76 937 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 FERMT2Q96AC1 680 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 PAWRQ96IZ0 340 aaKnown RBP13.1□□□□□ -0.31
ZNF548-211ENST00000600927 PIGSQ96S52 555 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 MAF1Q9H063 256 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 NUP62CLQ9H1M0 184 aa13.1□□□□□ -0.31
ZNF548-211ENST00000600927 hCG_1642624A0A1W2PR95 340 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 SMCO2A6NFE2 343 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 POTEB2H3BUK9 544 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 LAD1O00515 517 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 CAVIN2O95810 425 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 DEKP35659 375 aaKnown RBP13.09□□□□□ -0.31
ZNF548-211ENST00000600927 NAPAP54920 295 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 GHRHRQ02643 423 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 QRICH1Q2TAL8 776 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 ARMCX2Q7L311 632 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 HEATR3Q7Z4Q2 680 aa13.09□□□□□ -0.31
ZNF548-211ENST00000600927 CLSTN2Q9H4D0 955 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms