RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 BARHL2Q9NY43 387 aa18.14■□□□□ 0.49
RPS28-203ENST00000600659 TRIOBPQ9H2D6 2365 aa18.13■□□□□ 0.49
RPS28-203ENST00000600659 hCG_1984214I3L0E3 225 aa18.13■□□□□ 0.49
RPS28-203ENST00000600659 NKRFO15226 690 aaKnown RBP eCLIP18.13■□□□□ 0.49
RPS28-203ENST00000600659 PRPF3O43395 683 aaKnown RBP18.13■□□□□ 0.49
RPS28-203ENST00000600659 PPFIA3O75145 1194 aa18.13■□□□□ 0.49
RPS28-203ENST00000600659 TXNP10599 105 aaKnown RBP18.13■□□□□ 0.49
RPS28-203ENST00000600659 MYCLP12524 364 aaPredicted RBP18.13■□□□□ 0.49
RPS28-203ENST00000600659 ARHGAP1Q07960 439 aa18.13■□□□□ 0.49
RPS28-203ENST00000600659 SEMA3FQ13275 785 aa18.13■□□□□ 0.49
RPS28-203ENST00000600659 TTLL4Q14679 1199 aa18.13■□□□□ 0.49
RPS28-203ENST00000600659 LY6KQ17RY6 165 aa18.13■□□□□ 0.49
RPS28-203ENST00000600659 ZNF713Q8N859 430 aaPredicted RBP18.13■□□□□ 0.49
RPS28-203ENST00000600659 PCSK9Q8NBP7 692 aaKnown RBP18.13■□□□□ 0.49
RPS28-203ENST00000600659 KIF2CQ99661 725 aa18.13■□□□□ 0.49
RPS28-203ENST00000600659 SPC25Q9HBM1 224 aa18.13■□□□□ 0.49
RPS28-203ENST00000600659 DDX41Q9UJV9 622 aaKnown RBP18.13■□□□□ 0.49
RPS28-203ENST00000600659 ZMYND8Q9ULU4 1186 aaPredicted RBP18.13■□□□□ 0.49
RPS28-203ENST00000600659 NR2E3Q9Y5X4 410 aa18.13■□□□□ 0.49
RPS28-203ENST00000600659 GRIN2DO15399 1336 aa18.12■□□□□ 0.49
RPS28-203ENST00000600659 ELP1O95163 1332 aa18.12■□□□□ 0.49
RPS28-203ENST00000600659 SCG2P13521 617 aa18.12■□□□□ 0.49
RPS28-203ENST00000600659 CLK2P49760 499 aaKnown RBP18.12■□□□□ 0.49
RPS28-203ENST00000600659 CXCL17Q6UXB2 119 aa18.12■□□□□ 0.49
RPS28-203ENST00000600659 OR6J1Q8NGC5 347 aa18.12■□□□□ 0.49
RPS28-203ENST00000600659 SMARCC2Q8TAQ2 1214 aa18.12■□□□□ 0.49
RPS28-203ENST00000600659 INPP4AQ96PE3 977 aaPredicted RBP18.12■□□□□ 0.49
RPS28-203ENST00000600659 RNF26Q9BY78 433 aaPredicted RBP18.12■□□□□ 0.49
RPS28-203ENST00000600659 AP5M1Q9H0R1 490 aa18.12■□□□□ 0.49
RPS28-203ENST00000600659 RIC8AQ9NPQ8 531 aa18.12■□□□□ 0.49
RPS28-203ENST00000600659 STARD7Q9NQZ5 370 aa18.12■□□□□ 0.49
RPS28-203ENST00000600659 TPCN1Q9ULQ1 816 aa18.12■□□□□ 0.49
RPS28-203ENST00000600659 A6NJR5 290 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 LARGE1O95461 756 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 SYN1P17600 705 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 CCND2P30279 289 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 CDK7P50613 346 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 AK2P54819 239 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 NAPAP54920 295 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 SP2Q02086 613 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 SCRN1Q12765 414 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 SLC43A3Q8NBI5 491 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 PDLIM7Q9NR12 457 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 ATP11BQ9Y2G3 1177 aa18.11■□□□□ 0.49
RPS28-203ENST00000600659 ESYT2A0FGR8 921 aa18.1■□□□□ 0.49
RPS28-203ENST00000600659 EIF5BO60841 1220 aaKnown RBP18.1■□□□□ 0.49
RPS28-203ENST00000600659 PURAQ00577 322 aaKnown RBP18.1■□□□□ 0.49
RPS28-203ENST00000600659 TLE2Q04725 743 aa18.1■□□□□ 0.49
RPS28-203ENST00000600659 PCNX4Q63HM2 1172 aa18.1■□□□□ 0.49
RPS28-203ENST00000600659 ANKRD33Q7Z3H0 272 aa18.1■□□□□ 0.49
RPS28-203ENST00000600659 CUL5Q93034 780 aa18.1■□□□□ 0.49
RPS28-203ENST00000600659 EMID1Q96A84 441 aaPredicted RBP18.1■□□□□ 0.49
RPS28-203ENST00000600659 GLT1D1Q96MS3 346 aa18.1■□□□□ 0.49
RPS28-203ENST00000600659 UBA1P22314 1058 aaKnown RBP18.09■□□□□ 0.49
RPS28-203ENST00000600659 ICAM3P32942 547 aa18.09■□□□□ 0.49
RPS28-203ENST00000600659 STK3Q13188 491 aa18.09■□□□□ 0.49
RPS28-203ENST00000600659 SH3RF1Q7Z6J0 888 aa18.09■□□□□ 0.49
RPS28-203ENST00000600659 PGBD1Q96JS3 809 aa18.09■□□□□ 0.49
RPS28-203ENST00000600659 SLC26A6Q9BXS9 759 aa18.09■□□□□ 0.49
RPS28-203ENST00000600659 ZMYND12Q9H0C1 365 aa18.09■□□□□ 0.49
RPS28-203ENST00000600659 BCAS3Q9H6U6 928 aa18.09■□□□□ 0.49
RPS28-203ENST00000600659 RBM27Q9P2N5 1060 aaKnown RBP18.09■□□□□ 0.49
RPS28-203ENST00000600659 PCDHA6Q9UN73 950 aa18.09■□□□□ 0.49
RPS28-203ENST00000600659 PCDHA8Q9Y5H6 950 aa18.09■□□□□ 0.49
RPS28-203ENST00000600659 MRVI1Q9Y6F6 885 aa18.09■□□□□ 0.49
RPS28-203ENST00000600659 SMCO2A6NFE2 343 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 PFKFB2O60825 505 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 GH1P01241 217 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 MMP3P08254 477 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 ADCY7P51828 1080 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 PSMC6P62333 389 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 ST3GAL1Q11201 340 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 TEX2Q8IWB9 1127 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 FAM126BQ8IXS8 530 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 AFG1LQ8WV93 481 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 GDF15Q99988 308 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 TMEM260Q9NX78 707 aa18.08■□□□□ 0.49
RPS28-203ENST00000600659 COLQQ9Y215 455 aaPredicted RBP18.08■□□□□ 0.49
RPS28-203ENST00000600659 A0A0U1RQG5 324 aaPredicted RBP18.07■□□□□ 0.48
RPS28-203ENST00000600659 TRIM43BA6NCK2 446 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 ARVCFO00192 962 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 DTNBO60941 627 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 STAM2O75886 525 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 CABYRO75952 493 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 CTDNEP1O95476 244 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 HOXD8P13378 290 aaPredicted RBP18.07■□□□□ 0.48
RPS28-203ENST00000600659 ITGB5P18084 799 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 ITGB8P26012 769 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 CPT1AP50416 773 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 FAAP100Q0VG06 881 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 ME3Q16798 604 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 MYSM1Q5VVJ2 828 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 CRYGNQ8WXF5 182 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 TRIM43Q96BQ3 446 aaPredicted RBP18.07■□□□□ 0.48
RPS28-203ENST00000600659 TOX2Q96NM4 488 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 RTEL1Q9NZ71 1219 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 TELO2Q9Y4R8 837 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 UBIAD1Q9Y5Z9 338 aa18.07■□□□□ 0.48
RPS28-203ENST00000600659 SPATA31C2B4DYI2 1134 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms