RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PPP1R18Q6NYC8 613 aa32.4■■■□□ 2.78
SSBP4-206ENST00000599699 ZNF713Q8N859 430 aaPredicted RBP32.4■■■□□ 2.78
SSBP4-206ENST00000599699 PHKBQ93100 1093 aa32.4■■■□□ 2.78
SSBP4-206ENST00000599699 ZNF274Q96GC6 653 aaPredicted RBP32.4■■■□□ 2.78
SSBP4-206ENST00000599699 ZFP91Q96JP5 570 aaPredicted RBP32.4■■■□□ 2.78
SSBP4-206ENST00000599699 STXBP3O00186 592 aa32.39■■■□□ 2.78
SSBP4-206ENST00000599699 C8orf34Q49A92 452 aa32.39■■■□□ 2.78
SSBP4-206ENST00000599699 CCDC62Q6P9F0 684 aa32.39■■■□□ 2.78
SSBP4-206ENST00000599699 CXCL17Q6UXB2 119 aa32.39■■■□□ 2.78
SSBP4-206ENST00000599699 BARHL2Q9NY43 387 aa32.39■■■□□ 2.78
SSBP4-206ENST00000599699 RBM27Q9P2N5 1060 aaKnown RBP32.39■■■□□ 2.78
SSBP4-206ENST00000599699 ELP1O95163 1332 aa32.39■■■□□ 2.78
SSBP4-206ENST00000599699 PPFIA3O75145 1194 aa32.38■■■□□ 2.77
SSBP4-206ENST00000599699 PFKFB3Q16875 520 aaPredicted RBP32.38■■■□□ 2.77
SSBP4-206ENST00000599699 C1orf53Q5VUE5 145 aa32.38■■■□□ 2.77
SSBP4-206ENST00000599699 SLC26A6Q9BXS9 759 aa32.38■■■□□ 2.77
SSBP4-206ENST00000599699 PRKAG2Q9UGJ0 569 aa32.38■■■□□ 2.77
SSBP4-206ENST00000599699 SPDYE3A6NKU9 549 aa32.37■■■□□ 2.77
SSBP4-206ENST00000599699 CPLX1O14810 134 aa32.37■■■□□ 2.77
SSBP4-206ENST00000599699 PRPF3O43395 683 aaKnown RBP32.37■■■□□ 2.77
SSBP4-206ENST00000599699 GH1P01241 217 aa32.37■■■□□ 2.77
SSBP4-206ENST00000599699 SCG2P13521 617 aa32.37■■■□□ 2.77
SSBP4-206ENST00000599699 ADCY7P51828 1080 aa32.37■■■□□ 2.77
SSBP4-206ENST00000599699 TYW1BQ6NUM6 668 aa32.37■■■□□ 2.77
SSBP4-206ENST00000599699 FRMPD4Q14CM0 1322 aa32.36■■■□□ 2.77
SSBP4-206ENST00000599699 A0A0U1RQG5 324 aaPredicted RBP32.36■■■□□ 2.77
SSBP4-206ENST00000599699 SMCO2A6NFE2 343 aa32.36■■■□□ 2.77
SSBP4-206ENST00000599699 PQBP1O60828 265 aaKnown RBP32.36■■■□□ 2.77
SSBP4-206ENST00000599699 CABYRO75952 493 aa32.36■■■□□ 2.77
SSBP4-206ENST00000599699 MYL3P08590 195 aa32.36■■■□□ 2.77
SSBP4-206ENST00000599699 IFNAR1P17181 557 aa32.36■■■□□ 2.77
SSBP4-206ENST00000599699 TLE2Q04725 743 aa32.36■■■□□ 2.77
SSBP4-206ENST00000599699 CHRDL2Q6WN34 429 aa32.36■■■□□ 2.77
SSBP4-206ENST00000599699 RIC8AQ9NPQ8 531 aa32.36■■■□□ 2.77
SSBP4-206ENST00000599699 PRDM5Q9NQX1 630 aaPredicted RBP32.36■■■□□ 2.77
SSBP4-206ENST00000599699 DDX41Q9UJV9 622 aaKnown RBP32.36■■■□□ 2.77
SSBP4-206ENST00000599699 RGS20O76081 388 aa32.35■■■□□ 2.77
SSBP4-206ENST00000599699 ANKRD1Q15327 319 aa32.35■■■□□ 2.77
SSBP4-206ENST00000599699 NTRK3Q16288 839 aa32.35■■■□□ 2.77
SSBP4-206ENST00000599699 KCNV1Q6PIU1 500 aa32.35■■■□□ 2.77
SSBP4-206ENST00000599699 POLR3EQ9NVU0 708 aa32.35■■■□□ 2.77
SSBP4-206ENST00000599699 RTEL1Q9NZ71 1219 aa32.35■■■□□ 2.77
SSBP4-206ENST00000599699 STAM2O75886 525 aa32.34■■■□□ 2.77
SSBP4-206ENST00000599699 GNPTABQ3T906 1256 aa32.34■■■□□ 2.77
SSBP4-206ENST00000599699 CPLX2Q6PUV4 134 aaKnown RBP32.34■■■□□ 2.77
SSBP4-206ENST00000599699 RNF26Q9BY78 433 aaPredicted RBP32.34■■■□□ 2.77
SSBP4-206ENST00000599699 ALDH8A1Q9H2A2 487 aaPredicted RBP32.34■■■□□ 2.77
SSBP4-206ENST00000599699 EHMT1Q9H9B1 1298 aa32.34■■■□□ 2.77
SSBP4-206ENST00000599699 PCDHA6Q9UN73 950 aa32.34■■■□□ 2.77
SSBP4-206ENST00000599699 PCDHA8Q9Y5H6 950 aa32.34■■■□□ 2.77
SSBP4-206ENST00000599699 AK2P54819 239 aa32.33■■■□□ 2.77
SSBP4-206ENST00000599699 MRPS9P82933 396 aaKnown RBP32.33■■■□□ 2.77
SSBP4-206ENST00000599699 PCNX4Q63HM2 1172 aa32.33■■■□□ 2.77
SSBP4-206ENST00000599699 XRRA1Q6P2D8 792 aa32.33■■■□□ 2.77
SSBP4-206ENST00000599699 TRIM22Q8IYM9 498 aa32.33■■■□□ 2.77
SSBP4-206ENST00000599699 IL17RAQ96F46 866 aa32.33■■■□□ 2.77
SSBP4-206ENST00000599699 GLT8D2Q9H1C3 349 aa32.33■■■□□ 2.77
SSBP4-206ENST00000599699 DCDC2CA8MYV0 355 aa32.32■■■□□ 2.76
SSBP4-206ENST00000599699 NEK4P51957 841 aa32.32■■■□□ 2.76
SSBP4-206ENST00000599699 ARHGAP1Q07960 439 aa32.32■■■□□ 2.76
SSBP4-206ENST00000599699 SSRP1Q08945 709 aaKnown RBP32.32■■■□□ 2.76
SSBP4-206ENST00000599699 PKN1Q16512 942 aa32.32■■■□□ 2.76
SSBP4-206ENST00000599699 DHX37Q8IY37 1157 aaKnown RBP32.32■■■□□ 2.76
SSBP4-206ENST00000599699 CCDC12Q8WUD4 166 aaPredicted RBP32.32■■■□□ 2.76
SSBP4-206ENST00000599699 AFG1LQ8WV93 481 aa32.32■■■□□ 2.76
SSBP4-206ENST00000599699 SLKQ9H2G2 1235 aaPredicted RBP32.32■■■□□ 2.76
SSBP4-206ENST00000599699 COLQQ9Y215 455 aaPredicted RBP32.32■■■□□ 2.76
SSBP4-206ENST00000599699 A6NJR5 290 aa32.31■■■□□ 2.76
SSBP4-206ENST00000599699 ARVCFO00192 962 aa32.31■■■□□ 2.76
SSBP4-206ENST00000599699 PCDH10Q9P2E7 1040 aa32.31■■■□□ 2.76
SSBP4-206ENST00000599699 TPCN1Q9ULQ1 816 aa32.31■■■□□ 2.76
SSBP4-206ENST00000599699 MROH7Q68CQ1 1323 aa32.3■■■□□ 2.76
SSBP4-206ENST00000599699 KIAA1217Q5T5P2 1943 aa32.3■■■□□ 2.76
SSBP4-206ENST00000599699 SORBS3O60504 671 aa32.3■■■□□ 2.76
SSBP4-206ENST00000599699 KPNA6O60684 536 aa32.3■■■□□ 2.76
SSBP4-206ENST00000599699 TGFB3P10600 412 aa32.3■■■□□ 2.76
SSBP4-206ENST00000599699 PSMC6P62333 389 aa32.3■■■□□ 2.76
SSBP4-206ENST00000599699 PURAQ00577 322 aaKnown RBP32.3■■■□□ 2.76
SSBP4-206ENST00000599699 ITGA7Q13683 1181 aa32.3■■■□□ 2.76
SSBP4-206ENST00000599699 LAMC2Q13753 1193 aa32.3■■■□□ 2.76
SSBP4-206ENST00000599699 TEX2Q8IWB9 1127 aa32.3■■■□□ 2.76
SSBP4-206ENST00000599699 INPP4AQ96PE3 977 aaPredicted RBP32.3■■■□□ 2.76
SSBP4-206ENST00000599699 MTG1Q9BT17 334 aaPredicted RBP32.3■■■□□ 2.76
SSBP4-206ENST00000599699 CLTBP09497 229 aa32.29■■■□□ 2.76
SSBP4-206ENST00000599699 ANKRD33Q7Z3H0 272 aa32.29■■■□□ 2.76
SSBP4-206ENST00000599699 TOX2Q96NM4 488 aa32.29■■■□□ 2.76
SSBP4-206ENST00000599699 LBHD1Q9BQE6 289 aaPredicted RBP32.29■■■□□ 2.76
SSBP4-206ENST00000599699 C6orf50Q9HD87 102 aa32.29■■■□□ 2.76
SSBP4-206ENST00000599699 PDLIM7Q9NR12 457 aa32.29■■■□□ 2.76
SSBP4-206ENST00000599699 GGPS1O95749 300 aa32.28■■■□□ 2.76
SSBP4-206ENST00000599699 FOSP01100 380 aaPredicted RBP32.28■■■□□ 2.76
SSBP4-206ENST00000599699 UBA1P22314 1058 aaKnown RBP32.28■■■□□ 2.76
SSBP4-206ENST00000599699 MAGEA10P43363 369 aaPredicted RBP32.28■■■□□ 2.76
SSBP4-206ENST00000599699 CDK7P50613 346 aa32.28■■■□□ 2.76
SSBP4-206ENST00000599699 NLRX1Q86UT6 975 aa32.28■■■□□ 2.76
SSBP4-206ENST00000599699 PGBD1Q96JS3 809 aa32.28■■■□□ 2.76
SSBP4-206ENST00000599699 FIBPO43427 364 aa32.27■■■□□ 2.76
SSBP4-206ENST00000599699 MMP3P08254 477 aa32.27■■■□□ 2.76
SSBP4-206ENST00000599699 MDM2Q00987 491 aaPredicted RBP32.27■■■□□ 2.76
SSBP4-206ENST00000599699 SP2Q02086 613 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms