RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
IRF3-224ENST00000599680 TRIP12Q14669 1992 aaPredicted RBP16.54■□□□□ 0.24
IRF3-224ENST00000599680 TANC1Q9C0D5 1861 aa16.54■□□□□ 0.24
IRF3-224ENST00000599680 REC8O95072 547 aa16.53■□□□□ 0.24
IRF3-224ENST00000599680 CD4P01730 458 aa16.53■□□□□ 0.24
IRF3-224ENST00000599680 TSGA10IPQ3SY00 556 aa16.53■□□□□ 0.24
IRF3-224ENST00000599680 KCNV1Q6PIU1 500 aa16.53■□□□□ 0.24
IRF3-224ENST00000599680 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
IRF3-224ENST00000599680 CMTR1Q8N1G2 835 aaKnown RBP16.53■□□□□ 0.24
IRF3-224ENST00000599680 CCDC82Q8N4S0 544 aa16.53■□□□□ 0.24
IRF3-224ENST00000599680 SRBD1Q8N5C6 995 aaKnown RBP16.53■□□□□ 0.24
IRF3-224ENST00000599680 RNPC3Q96LT9 517 aaKnown RBP16.53■□□□□ 0.24
IRF3-224ENST00000599680 TCEANC2Q96MN5 208 aa16.53■□□□□ 0.24
IRF3-224ENST00000599680 TRPV6Q9H1D0 765 aa16.53■□□□□ 0.24
IRF3-224ENST00000599680 HIPK3Q9H422 1215 aa16.53■□□□□ 0.24
IRF3-224ENST00000599680 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
IRF3-224ENST00000599680 GRIN2DO15399 1336 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 SCN5AQ14524 2016 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 ZBTB43O43298 467 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 B4GALT4O60513 344 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 SUPT20HL2P0C7V6 817 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 ARHGAP1Q07960 439 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 ADCK5Q3MIX3 580 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 APOA5Q6Q788 366 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 TMTC3Q6ZXV5 915 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 VSIG10LQ86VR7 867 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 DHX37Q8IY37 1157 aaKnown RBP16.52■□□□□ 0.24
IRF3-224ENST00000599680 DEFB123Q8N688 67 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 AFG1LQ8WV93 481 aa16.52■□□□□ 0.24
IRF3-224ENST00000599680 ALDH8A1Q9H2A2 487 aaPredicted RBP16.52■□□□□ 0.24
IRF3-224ENST00000599680 DDX41Q9UJV9 622 aaKnown RBP16.52■□□□□ 0.24
IRF3-224ENST00000599680 GBF1Q92538 1859 aa16.52■□□□□ 0.23
IRF3-224ENST00000599680 KAT6AQ92794 2004 aa16.52■□□□□ 0.23
IRF3-224ENST00000599680 CENPBP07199 599 aaPredicted RBP16.51■□□□□ 0.23
IRF3-224ENST00000599680 MMP3P08254 477 aa16.51■□□□□ 0.23
IRF3-224ENST00000599680 CASTP20810 708 aaKnown RBP16.51■□□□□ 0.23
IRF3-224ENST00000599680 CYP2C18P33260 490 aa16.51■□□□□ 0.23
IRF3-224ENST00000599680 EXOSC10Q01780 885 aaKnown RBP16.51■□□□□ 0.23
IRF3-224ENST00000599680 LAMC2Q13753 1193 aa16.51■□□□□ 0.23
IRF3-224ENST00000599680 DGKDQ16760 1214 aa16.51■□□□□ 0.23
IRF3-224ENST00000599680 RTN1Q16799 776 aa16.51■□□□□ 0.23
IRF3-224ENST00000599680 NBPF20Q3BBV1 942 aa16.51■□□□□ 0.23
IRF3-224ENST00000599680 GNPTABQ3T906 1256 aa16.51■□□□□ 0.23
IRF3-224ENST00000599680 IL31RAQ8NI17 732 aa16.51■□□□□ 0.23
IRF3-224ENST00000599680 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
IRF3-224ENST00000599680 NOD1Q9Y239 953 aa16.51■□□□□ 0.23
IRF3-224ENST00000599680 SZT2Q5T011 3432 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 KLF18A0A0U1RQI7 1052 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 hCG_1642624A0A1W2PR95 340 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 GOLGA8AA7E2F4 631 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 GOLGA8BA8MQT2 603 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 CSF2RAP15509 400 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 EPHB4P54760 987 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 NFRKBQ6P4R8 1299 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 BLOC1S2Q6QNY1 142 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 HEATR3Q7Z4Q2 680 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
IRF3-224ENST00000599680 PSTPIP2Q9H939 334 aa16.5■□□□□ 0.23
IRF3-224ENST00000599680 SORBS3O60504 671 aa16.49■□□□□ 0.23
IRF3-224ENST00000599680 STAM2O75886 525 aa16.49■□□□□ 0.23
IRF3-224ENST00000599680 GGPS1O95749 300 aa16.49■□□□□ 0.23
IRF3-224ENST00000599680 TGFB3P10600 412 aa16.49■□□□□ 0.23
IRF3-224ENST00000599680 HSPA4P34932 840 aa16.49■□□□□ 0.23
IRF3-224ENST00000599680 PTPN11Q06124 597 aaPredicted RBP16.49■□□□□ 0.23
IRF3-224ENST00000599680 PSRC1Q6PGN9 363 aaPredicted RBP16.49■□□□□ 0.23
IRF3-224ENST00000599680 Q7L0L9 218 aa16.49■□□□□ 0.23
IRF3-224ENST00000599680 EMID1Q96A84 441 aaPredicted RBP16.49■□□□□ 0.23
IRF3-224ENST00000599680 ZFP91Q96JP5 570 aaPredicted RBP16.49■□□□□ 0.23
IRF3-224ENST00000599680 NOC4LQ9BVI4 516 aaKnown RBP16.49■□□□□ 0.23
IRF3-224ENST00000599680 TRMT13Q9NUP7 481 aaKnown RBP16.49■□□□□ 0.23
IRF3-224ENST00000599680 BRPF3Q9ULD4 1205 aa16.49■□□□□ 0.23
IRF3-224ENST00000599680 SNX14Q9Y5W7 946 aa16.49■□□□□ 0.23
IRF3-224ENST00000599680 FRMPD4Q14CM0 1322 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 LAMA3Q16787 3333 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 PIK3CDO00329 1044 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 RGS20O76081 388 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 PSMA5P28066 241 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 CCL23P55773 120 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 ZNF697Q5TEC3 545 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 PPTC7Q8NI37 304 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 PPP1R13LQ8WUF5 828 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 SPATA33Q96N06 139 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.48■□□□□ 0.232e-7■■□□□ 14
IRF3-224ENST00000599680 KATNAL1Q9BW62 490 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 MTIF3Q9H2K0 278 aaKnown RBP16.48■□□□□ 0.23
IRF3-224ENST00000599680 EHMT1Q9H9B1 1298 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 MLXIPQ9HAP2 919 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 IL23AQ9NPF7 189 aa16.48■□□□□ 0.23
IRF3-224ENST00000599680 UMODL1Q5DID0 1318 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 CNTNAP5Q8WYK1 1306 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 SPDYE3A6NKU9 549 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 MEIS2O14770 477 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 ACRP10323 421 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 CYP2C9P11712 490 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 CPA1P15085 419 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 UBA1P22314 1058 aaKnown RBP16.47■□□□□ 0.23
IRF3-224ENST00000599680 NAPAP54920 295 aa16.47■□□□□ 0.23
IRF3-224ENST00000599680 SMAD3P84022 425 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms