RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 CCDC138Q96M89 665 aa12.85□□□□□ -0.35
SCN8A-208ENST00000599343 FGD4Q96M96 766 aa12.85□□□□□ -0.35
SCN8A-208ENST00000599343 RTEL1Q9NZ71 1219 aa12.85□□□□□ -0.35
SCN8A-208ENST00000599343 FNDC3AQ9Y2H6 1198 aaKnown RBP12.85□□□□□ -0.35
SCN8A-208ENST00000599343 H0YCG3 227 aa12.85□□□□□ -0.35
SCN8A-208ENST00000599343 HNRNPDLO14979 420 aaKnown RBP12.85□□□□□ -0.35
SCN8A-208ENST00000599343 CTNND1O60716 968 aaKnown RBP12.85□□□□□ -0.35
SCN8A-208ENST00000599343 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCN8A-208ENST00000599343 FAM133AQ8N9E0 248 aa12.85□□□□□ -0.35
SCN8A-208ENST00000599343 KLHL29Q96CT2 875 aa12.85□□□□□ -0.35
SCN8A-208ENST00000599343 ABCF3Q9NUQ8 709 aa12.85□□□□□ -0.35
SCN8A-208ENST00000599343 ORC6Q9Y5N6 252 aa12.85□□□□□ -0.35
SCN8A-208ENST00000599343 CSADQ9Y600 493 aa12.85□□□□□ -0.35
SCN8A-208ENST00000599343 RGS12O14924 1447 aa12.85□□□□□ -0.35
SCN8A-208ENST00000599343 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 ECEL1O95672 775 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 LMNB2Q03252 620 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 CCPG1Q9ULG6 757 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 AFPP02771 609 aaKnown RBP12.84□□□□□ -0.35
SCN8A-208ENST00000599343 DHX9Q08211 1270 aaKnown RBP12.84□□□□□ -0.35
SCN8A-208ENST00000599343 TAF11Q15544 211 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 AOC3Q16853 763 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 KIAA0825Q8IV33 1275 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 RYBPQ8N488 228 aaPredicted RBP12.84□□□□□ -0.35
SCN8A-208ENST00000599343 GOLGA8CPA6NN73 597 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 POLE2P56282 527 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 BASP1P80723 227 aaKnown RBP12.84□□□□□ -0.35
SCN8A-208ENST00000599343 NNTQ13423 1086 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 FBXO41Q8TF61 875 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 SPC25Q9HBM1 224 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 CFLARO15519 480 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 DNAJC8O75937 253 aaPredicted RBP12.84□□□□□ -0.35
SCN8A-208ENST00000599343 EEF1B2P24534 225 aaKnown RBP12.84□□□□□ -0.35
SCN8A-208ENST00000599343 HSPA2P54652 639 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 SLC7A5Q01650 507 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 ADCK5Q3MIX3 580 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 GALNT17Q6IS24 598 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 PARD3BQ8TEW8 1205 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 LARP4BQ92615 738 aaKnown RBP12.84□□□□□ -0.35
SCN8A-208ENST00000599343 PER1O15534 1290 aaPredicted RBP12.84□□□□□ -0.35
SCN8A-208ENST00000599343 GFPT2O94808 682 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 PDE6BP35913 854 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 TMED1Q13445 227 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 MCF2L2Q86YR7 1114 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 DNAAF3Q8N9W5 541 aa12.84□□□□□ -0.35
SCN8A-208ENST00000599343 SPATS2LQ9NUQ6 558 aaKnown RBP12.84□□□□□ -0.35
SCN8A-208ENST00000599343 NCF2P19878 526 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 EFCAB13Q8IY85 973 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 PCDHA1Q9Y5I3 950 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 SRGAP2BP0DMP2 458 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 ALDH1B1P30837 517 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 PSMC2P35998 433 aaKnown RBP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 ZNF449Q6P9G9 518 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 DARS2Q6PI48 645 aaKnown RBP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 TDRD7Q8NHU6 1098 aaKnown RBP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 P2RX5Q93086 422 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 USP44Q9H0E7 712 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 KIF9Q9HAQ2 790 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 NRBP2Q9NSY0 501 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 EDC4Q6P2E9 1401 aaKnown RBP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 PGRMC1O00264 195 aaKnown RBP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 TTLL7Q6ZT98 887 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 FAM149B1Q96BN6 582 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 ORAI2Q96SN7 254 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 MAN1B1Q9UKM7 699 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 NOVA2Q9UNW9 492 aaKnown RBP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 GOLGA8QA0A0J9YX86 632 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 GOLGA8OA6NCC3 632 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 GOLGA8NF8WBI6 632 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 MT-ND3P03897 115 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 ZBTB41Q5SVQ8 909 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 MCTP2Q6DN12 878 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 ARHGEF18Q6ZSZ5 1173 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 TRMT10CQ7L0Y3 403 aaKnown RBP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 SPICE1Q8N0Z3 855 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 JPH2Q9BR39 696 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 FTOQ9C0B1 505 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCN8A-208ENST00000599343 SLC38A10Q9HBR0 1119 aa12.83□□□□□ -0.36
SCN8A-208ENST00000599343 MEIS1O00470 390 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 MCF2LO15068 1137 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 MAP3K7O43318 606 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 RNASELQ05823 741 aaKnown RBP12.82□□□□□ -0.36
SCN8A-208ENST00000599343 DMTNQ08495 405 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 FAM186BQ8IYM0 893 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 SSH3Q8TE77 659 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 SPTLC3Q9NUV7 552 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 DNAJC17Q9NVM6 304 aaKnown RBP12.82□□□□□ -0.36
SCN8A-208ENST00000599343 ANKRD36BP1Q96IX9 119 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 ITSN2Q9NZM3 1697 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 ADORA1P30542 326 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 BPIFB4P59827 614 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 ESRRGP62508 458 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 FAM160B1Q5W0V3 765 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 KRT26Q7Z3Y9 468 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 TRIM42Q8IWZ5 723 aa12.82□□□□□ -0.36
SCN8A-208ENST00000599343 AP1M1Q9BXS5 423 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms