RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SELPP16109 830 aa19.28■□□□□ 0.68
SHKBP1-215ENST00000597649 KCNJ6P48051 423 aa19.28■□□□□ 0.68
SHKBP1-215ENST00000597649 PDE1AP54750 535 aa19.28■□□□□ 0.68
SHKBP1-215ENST00000597649 ANKRD45Q5TZF3 282 aa19.28■□□□□ 0.68
SHKBP1-215ENST00000597649 CHST3Q7LGC8 479 aa19.28■□□□□ 0.68
SHKBP1-215ENST00000597649 GDPD5Q8WTR4 605 aa19.28■□□□□ 0.68
SHKBP1-215ENST00000597649 C11orf16Q9NQ32 467 aa19.28■□□□□ 0.68
SHKBP1-215ENST00000597649 PIEZO1Q92508 2521 aa19.28■□□□□ 0.68
SHKBP1-215ENST00000597649 GH1P01241 217 aa19.27■□□□□ 0.68
SHKBP1-215ENST00000597649 CKBP12277 381 aa19.27■□□□□ 0.68
SHKBP1-215ENST00000597649 RBL2Q08999 1139 aa19.27■□□□□ 0.68
SHKBP1-215ENST00000597649 TRAF7Q6Q0C0 670 aa19.27■□□□□ 0.68
SHKBP1-215ENST00000597649 LRRC8DQ7L1W4 858 aa19.27■□□□□ 0.68
SHKBP1-215ENST00000597649 WNT8BQ93098 351 aa19.27■□□□□ 0.68
SHKBP1-215ENST00000597649 ZKSCAN3Q9BRR0 538 aa19.27■□□□□ 0.68
SHKBP1-215ENST00000597649 SUGCTQ9HAC7 445 aa19.27■□□□□ 0.68
SHKBP1-215ENST00000597649 PPP4R2Q9NY27 417 aa19.27■□□□□ 0.68
SHKBP1-215ENST00000597649 HDAC6Q9UBN7 1215 aa19.27■□□□□ 0.68
SHKBP1-215ENST00000597649 PTPRSQ13332 1948 aa19.27■□□□□ 0.67
SHKBP1-215ENST00000597649 B4DLN1 442 aa19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 HOXD11P31277 338 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 MRPL12P52815 198 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 NMIQ13287 307 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 TRIM71Q2Q1W2 868 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 GPATCH4Q5T3I0 446 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 MFSD6Q6ZSS7 791 aa19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 RAD9AQ99638 391 aa19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 ZBED2Q9BTP6 218 aa19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 LMCD1Q9NZU5 365 aa19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 GTF2IRD1Q9UHL9 959 aa19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 DDX41Q9UJV9 622 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 TANC1Q9C0D5 1861 aa19.26■□□□□ 0.67
SHKBP1-215ENST00000597649 ZMYM6O95789 1325 aa19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 GJB5O95377 273 aa19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 CASTP20810 708 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 ZNF200P98182 395 aaPredicted RBP19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 MBTPS1Q14703 1052 aa19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 CDC37Q16543 378 aaPredicted RBP19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 B4GALNT3Q6L9W6 998 aa19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 CNKSR3Q6P9H4 555 aa19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 ADGRF4Q8IZF3 695 aa19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 CCDC155Q8N6L0 562 aa19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 NSUN6Q8TEA1 469 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 MTUS1Q9ULD2 1270 aa19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 MUC6Q6W4X9 2439 aa19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 NEDD4P46934 1319 aa19.25■□□□□ 0.67
SHKBP1-215ENST00000597649 PSEN2P49810 448 aa19.24■□□□□ 0.67
SHKBP1-215ENST00000597649 ERVK-21P61565 698 aa19.24■□□□□ 0.67
SHKBP1-215ENST00000597649 HIC1Q14526 733 aa19.24■□□□□ 0.67
SHKBP1-215ENST00000597649 STXBP2Q15833 593 aa19.24■□□□□ 0.67
SHKBP1-215ENST00000597649 TMEM31Q5JXX7 168 aa19.24■□□□□ 0.67
SHKBP1-215ENST00000597649 DGKHQ86XP1 1220 aa19.24■□□□□ 0.67
SHKBP1-215ENST00000597649 SMC5Q8IY18 1101 aa19.24■□□□□ 0.67
SHKBP1-215ENST00000597649 IWS1Q96ST2 819 aa19.24■□□□□ 0.67
SHKBP1-215ENST00000597649 RMDN3Q96TC7 470 aa19.24■□□□□ 0.67
SHKBP1-215ENST00000597649 ALG1Q9BT22 464 aa19.24■□□□□ 0.67
SHKBP1-215ENST00000597649 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 ABHD14A-ACY1A0A1B0GW23 586 aa19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 LINC01553A4QN01 128 aa19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 FAM86C2PA6NEL3 165 aa19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 HAS3O00219 553 aa19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 PCP11498 1178 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 DGKDQ16760 1214 aa19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 ZNF618Q5T7W0 954 aa19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 EMID1Q96A84 441 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 MAF1Q9H063 256 aa19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 ARIH1Q9Y4X5 557 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 ABCB11O95342 1321 aa19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 CCDC171Q6TFL3 1326 aa19.23■□□□□ 0.67
SHKBP1-215ENST00000597649 GPR37L1O60883 481 aa19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 ZNF286BP0CG31 522 aa19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 EIF2AK2P19525 551 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 MFSD10Q14728 455 aa19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 QRICH1Q2TAL8 776 aa19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 FAM117BQ6P1L5 589 aa19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 C7orf31Q8N865 590 aa19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 PNMA1Q8ND90 353 aa19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 ANKS1AQ92625 1134 aa19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 ESR2Q92731 530 aa19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 TGS1Q96RS0 853 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-215ENST00000597649 PI4K2BG5E9Z4 385 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 OPLAHO14841 1288 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 EIF3JO75822 258 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 TRIOO75962 3097 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 RGS20O76081 388 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 PARNO95453 639 aaKnown RBP19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 F2P00734 622 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 NR3C2P08235 984 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 PTK7Q13308 1070 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 IKBKEQ14164 716 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 KIAA0753Q2KHM9 967 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 ARHGEF16Q5VV41 709 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 CENPQQ7L2Z9 268 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 UBE2ZQ9H832 354 aaPredicted RBP19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 JMJD4Q9H9V9 463 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 VAT1LQ9HCJ6 419 aa19.21■□□□□ 0.67
SHKBP1-215ENST00000597649 MKRN4PQ13434 485 aaPredicted RBP19.2■□□□□ 0.66
SHKBP1-215ENST00000597649 LAMC2Q13753 1193 aa19.2■□□□□ 0.66
SHKBP1-215ENST00000597649 TICAM2Q86XR7 235 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms