RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 MRPS9P82933 396 aaKnown RBP17.21■□□□□ 0.35
SCN1B-204ENST00000596348 BEX3Q00994 111 aa17.21■□□□□ 0.35
SCN1B-204ENST00000596348 AKAP17AQ02040 695 aaKnown RBP17.21■□□□□ 0.35
SCN1B-204ENST00000596348 SSRP1Q08945 709 aaKnown RBP17.21■□□□□ 0.35
SCN1B-204ENST00000596348 ST3GAL1Q11201 340 aa17.21■□□□□ 0.35
SCN1B-204ENST00000596348 COPS5Q92905 334 aa17.21■□□□□ 0.35
SCN1B-204ENST00000596348 GTF3C6Q969F1 213 aa17.21■□□□□ 0.35
SCN1B-204ENST00000596348 SENP6Q9GZR1 1112 aaPredicted RBP17.21■□□□□ 0.35
SCN1B-204ENST00000596348 UPF2Q9HAU5 1272 aaKnown RBP17.21■□□□□ 0.35
SCN1B-204ENST00000596348 PHF24Q9UPV7 400 aa17.21■□□□□ 0.35
SCN1B-204ENST00000596348 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
SCN1B-204ENST00000596348 DYNC1LI2O43237 492 aaPredicted RBP17.2■□□□□ 0.34
SCN1B-204ENST00000596348 TRIM22Q8IYM9 498 aa17.2■□□□□ 0.34
SCN1B-204ENST00000596348 FERMT2Q96AC1 680 aa17.2■□□□□ 0.34
SCN1B-204ENST00000596348 AIFM3Q96NN9 605 aa17.2■□□□□ 0.34
SCN1B-204ENST00000596348 ZMYND12Q9H0C1 365 aa17.2■□□□□ 0.34
SCN1B-204ENST00000596348 TMEM260Q9NX78 707 aa17.2■□□□□ 0.34
SCN1B-204ENST00000596348 VPS54Q9P1Q0 977 aa17.2■□□□□ 0.34
SCN1B-204ENST00000596348 Q9Y3F1 56 aa17.2■□□□□ 0.34
SCN1B-204ENST00000596348 TXNP10599 105 aaKnown RBP17.19■□□□□ 0.34
SCN1B-204ENST00000596348 CLK2P49760 499 aaKnown RBP17.19■□□□□ 0.34
SCN1B-204ENST00000596348 ACLYP53396 1101 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 TTLL4Q14679 1199 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 KCNA10Q16322 511 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 FSCN1Q16658 493 aaKnown RBP17.19■□□□□ 0.34
SCN1B-204ENST00000596348 LY6KQ17RY6 165 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 LRRC26Q2I0M4 334 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 GNASQ5JWF2 1037 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 PCNX4Q63HM2 1172 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 CPLX2Q6PUV4 134 aaKnown RBP17.19■□□□□ 0.34
SCN1B-204ENST00000596348 PGBD1Q96JS3 809 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 TSEN34Q9BSV6 310 aaKnown RBP17.19■□□□□ 0.34
SCN1B-204ENST00000596348 HTATIP2Q9BUP3 242 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 AP5M1Q9H0R1 490 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 SPC25Q9HBM1 224 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 PCDHA6Q9UN73 950 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 PCDHA8Q9Y5H6 950 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 MYH7BA7E2Y1 1941 aa17.19■□□□□ 0.34
SCN1B-204ENST00000596348 A0A1W2PQ45 241 aaPredicted RBP17.18■□□□□ 0.34
SCN1B-204ENST00000596348 A0A1W2PQY0 241 aa17.18■□□□□ 0.34
SCN1B-204ENST00000596348 SPDYE3A6NKU9 549 aa17.18■□□□□ 0.34
SCN1B-204ENST00000596348 DEXIO95424 95 aa17.18■□□□□ 0.34
SCN1B-204ENST00000596348 ATN1P54259 1190 aaPredicted RBP17.18■□□□□ 0.34
SCN1B-204ENST00000596348 RABEP1Q15276 862 aa17.18■□□□□ 0.34
SCN1B-204ENST00000596348 TEX2Q8IWB9 1127 aa17.18■□□□□ 0.34
SCN1B-204ENST00000596348 INPP4AQ96PE3 977 aaPredicted RBP17.18■□□□□ 0.34
SCN1B-204ENST00000596348 DDX41Q9UJV9 622 aaKnown RBP17.18■□□□□ 0.34
SCN1B-204ENST00000596348 LIMCH1Q9UPQ0 1083 aa17.18■□□□□ 0.34
SCN1B-204ENST00000596348 DOCK5Q9H7D0 1870 aa17.18■□□□□ 0.34
SCN1B-204ENST00000596348 STK36Q9NRP7 1315 aa17.18■□□□□ 0.34
SCN1B-204ENST00000596348 NKRFO15226 690 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCN1B-204ENST00000596348 CDKL5O76039 1030 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 ASGR1P07306 291 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 RANBP2P49792 3224 aaKnown RBP17.17■□□□□ 0.34
SCN1B-204ENST00000596348 ARHGAP1Q07960 439 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 SEMA3FQ13275 785 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 NSUN7Q8NE18 718 aaKnown RBP17.17■□□□□ 0.34
SCN1B-204ENST00000596348 OR6J1Q8NGC5 347 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 CCDC12Q8WUD4 166 aaPredicted RBP17.17■□□□□ 0.34
SCN1B-204ENST00000596348 DPF3Q92784 378 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 ANO3Q9BYT9 981 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 GLT8D2Q9H1C3 349 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 SH3GLB2Q9NR46 395 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 RTEL1Q9NZ71 1219 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 MRVI1Q9Y6F6 885 aa17.17■□□□□ 0.34
SCN1B-204ENST00000596348 MOXD2PA6NHM9 499 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 JAK2O60674 1132 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 FDPSP14324 419 aaKnown RBP17.16■□□□□ 0.34
SCN1B-204ENST00000596348 SP2Q02086 613 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 AP3B2Q13367 1082 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 NPY5RQ15761 445 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 JAKMIP3Q5VZ66 844 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 XRRA1Q6P2D8 792 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 CXCL17Q6UXB2 119 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 PCSK9Q8NBP7 692 aaKnown RBP17.16■□□□□ 0.34
SCN1B-204ENST00000596348 CCDC148Q8NFR7 591 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 RASGRP4Q8TDF6 673 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 C6orf50Q9HD87 102 aa17.16■□□□□ 0.34
SCN1B-204ENST00000596348 STAM2O75886 525 aa17.15■□□□□ 0.34
SCN1B-204ENST00000596348 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
SCN1B-204ENST00000596348 FOSP01100 380 aaPredicted RBP17.15■□□□□ 0.34
SCN1B-204ENST00000596348 GH1P01241 217 aa17.15■□□□□ 0.34
SCN1B-204ENST00000596348 ITGB5P18084 799 aa17.15■□□□□ 0.34
SCN1B-204ENST00000596348 UBA1P22314 1058 aaKnown RBP17.15■□□□□ 0.34
SCN1B-204ENST00000596348 ICAM3P32942 547 aa17.15■□□□□ 0.34
SCN1B-204ENST00000596348 SREBF1P36956 1147 aa17.15■□□□□ 0.34
SCN1B-204ENST00000596348 SNX17Q15036 470 aa17.15■□□□□ 0.34
SCN1B-204ENST00000596348 SLC39A5Q6ZMH5 540 aa17.15■□□□□ 0.34
SCN1B-204ENST00000596348 REXO1Q8N1G1 1221 aaKnown RBP17.15■□□□□ 0.34
SCN1B-204ENST00000596348 BCAS3Q9H6U6 928 aa17.15■□□□□ 0.34
SCN1B-204ENST00000596348 GJB4Q9NTQ9 266 aa17.15■□□□□ 0.34
SCN1B-204ENST00000596348 ORC3Q9UBD5 711 aaPredicted RBP17.15■□□□□ 0.34
SCN1B-204ENST00000596348 SCN10AQ9Y5Y9 1956 aa17.15■□□□□ 0.34
SCN1B-204ENST00000596348 A6NJR5 290 aa17.14■□□□□ 0.33
SCN1B-204ENST00000596348 SPATA31C2B4DYI2 1134 aa17.14■□□□□ 0.33
SCN1B-204ENST00000596348 EVI5O60447 810 aa17.14■□□□□ 0.33
SCN1B-204ENST00000596348 SORBS3O60504 671 aa17.14■□□□□ 0.33
SCN1B-204ENST00000596348 GNA11P29992 359 aa17.14■□□□□ 0.33
SCN1B-204ENST00000596348 RTP1P59025 263 aa17.14■□□□□ 0.33
SCN1B-204ENST00000596348 GNPTABQ3T906 1256 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms