RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 TLE2Q04725 743 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 ARHGAP1Q07960 439 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 TTLL4Q14679 1199 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 LY6KQ17RY6 165 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 C8orf34Q49A92 452 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 HEATR3Q7Z4Q2 680 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 SH3RF1Q7Z6J0 888 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 OR6J1Q8NGC5 347 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 GDF15Q99988 308 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 LARP6Q9BRS8 491 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 NCOA5Q9HCD5 579 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 PDLIM7Q9NR12 457 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 DDX41Q9UJV9 622 aaKnown RBP12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 WDR81Q562E7 1941 aa12.66□□□□□ -0.38
SHKBP1-206ENST00000595523 GRIN2DO15399 1336 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 A6NJR5 290 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 STXBP3O00186 592 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 NKRFO15226 690 aaKnown RBP eCLIP12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 MAGEA10P43363 369 aaPredicted RBP12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 ANAPC15P60006 121 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 PKN1Q16512 942 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 UBE2SQ16763 222 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 ANKRD33Q7Z3H0 272 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 SLC43A3Q8NBI5 491 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 SMARCC2Q8TAQ2 1214 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 PHKBQ93100 1093 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 GLT1D1Q96MS3 346 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 BARHL2Q9NY43 387 aa12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
SHKBP1-206ENST00000595523 A0A0U1RQG5 324 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 TRIM43BA6NCK2 446 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 ADAMTS3O15072 1205 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 PQBP1O60828 265 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 PPFIA3O75145 1194 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 CCND2P30279 289 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 NAPAP54920 295 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 PSMC6P62333 389 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 CCT2P78371 535 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 PURAQ00577 322 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 SP2Q02086 613 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 FAAP100Q0VG06 881 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 SEMA3FQ13275 785 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 PFKFB3Q16875 520 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 HABP4Q5JVS0 413 aaKnown RBP12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 PPP1R18Q6NYC8 613 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 CUL5Q93034 780 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 INPP4AQ96PE3 977 aaPredicted RBP12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 PDRG1Q9NUG6 133 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 SCN5AQ14524 2016 aa12.64□□□□□ -0.39
SHKBP1-206ENST00000595523 TANC1Q9C0D5 1861 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 KAT6AQ92794 2004 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 hCG_1984214I3L0E3 225 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 ARVCFO00192 962 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 PRPF3O43395 683 aaKnown RBP12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 CABYRO75952 493 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 GH1P01241 217 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 MMP3P08254 477 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 SCG2P13521 617 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 IFNAR1P17181 557 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 ITGB8P26012 769 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 CPT1AP50416 773 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 PCNX4Q63HM2 1172 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 FAM126BQ8IXS8 530 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 ZNF713Q8N859 430 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 AFG1LQ8WV93 481 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 EMID1Q96A84 441 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 ZNF274Q96GC6 653 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 TOX2Q96NM4 488 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 ALDH8A1Q9H2A2 487 aaPredicted RBP12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 BCAS3Q9H6U6 928 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 RIC8AQ9NPQ8 531 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 MRVI1Q9Y6F6 885 aa12.63□□□□□ -0.39
SHKBP1-206ENST00000595523 ZEB2O60315 1214 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 CD4P01730 458 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 MYL3P08590 195 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 CLTBP09497 229 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 UBA1P22314 1058 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 BMP8BP34820 402 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 CLK2P49760 499 aaKnown RBP12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 ITGA7Q13683 1181 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 VTI1AQ96AJ9 217 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 RNF26Q9BY78 433 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 PRDM5Q9NQX1 630 aaPredicted RBP12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 POLR3EQ9NVU0 708 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 RTEL1Q9NZ71 1219 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 TBX21Q9UL17 535 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 TPCN1Q9ULQ1 816 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 PCDHA6Q9UN73 950 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 PCDHA8Q9Y5H6 950 aa12.62□□□□□ -0.39
SHKBP1-206ENST00000595523 SMCO2A6NFE2 343 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 SPATA31C2B4DYI2 1134 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 KIAA0355O15063 1070 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 SORBS3O60504 671 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 STAM2O75886 525 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 GGPS1O95749 300 aa12.61□□□□□ -0.39
SHKBP1-206ENST00000595523 HOXD8P13378 290 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms