RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 UIMC1Q96RL1 719 aa19.04■□□□□ 0.64
SHKBP1-205ENST00000594973 MMTAG2Q9BU76 263 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-205ENST00000594973 ZNF70Q9UC06 446 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-205ENST00000594973 LRWD1Q9UFC0 647 aa19.04■□□□□ 0.64
SHKBP1-205ENST00000594973 PRCPP42785 496 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 TUBB4BP68371 445 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 PAK1Q13153 545 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 EFCAB13Q8IY85 973 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 NELFBQ8WX92 580 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 DRC1Q96MC2 740 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 GMLQ99445 158 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 A0A1W2PRG0 241 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 POTEMA6NI47 508 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 ORC2Q13416 577 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 USH1GQ495M9 461 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 CDAN1Q8IWY9 1227 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 CEP89Q96ST8 783 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 EPC1Q9H2F5 836 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 VPS18Q9P253 973 aa19.03■□□□□ 0.64
SHKBP1-205ENST00000594973 CDKAL1Q5VV42 579 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 SPECC1LQ69YQ0 1117 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 NIM1KQ8IY84 436 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 GMCL1P1Q8NEA9 526 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 DDX25Q9UHL0 483 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 RWDD2AQ9UIY3 292 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 ARHGAP6O43182 974 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 TEX33O43247 280 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 TAL1P17542 331 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 ECE1P42892 770 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 GSCP56915 257 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 NR1I3Q14994 352 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 TMEM266Q2M3C6 531 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 MCTP2Q6DN12 878 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 MMS22LQ6ZRQ5 1243 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 CALML4Q96GE6 196 aa19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 PPP1R1BQ9UD71 204 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-205ENST00000594973 A0A1B0GTH6 734 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 KLRC4O43908 158 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 APTXQ7Z2E3 356 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 TMEM39BQ9GZU3 492 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 HERC5Q9UII4 1024 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 ZNRF3Q9ULT6 936 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 MARCH6O60337 910 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 BMP3P12645 472 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 PPP4R3AQ6IN85 833 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 MIGA2Q7L4E1 593 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 SLC16A10Q8TF71 515 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 FAM151AQ8WW52 585 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 GMCL1Q96IK5 515 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 CUEDC2Q9H467 287 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 SCAF8Q9UPN6 1271 aaKnown RBP19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 ATF5Q9Y2D1 282 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 PPP2R2CQ9Y2T4 447 aa19.01■□□□□ 0.63
SHKBP1-205ENST00000594973 TRIM49BA6NDI0 452 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 MYL1P05976 194 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 CCT6AP40227 531 aaKnown RBP19■□□□□ 0.63
SHKBP1-205ENST00000594973 FXR2P51116 673 aaKnown RBP eCLIP19■□□□□ 0.63
SHKBP1-205ENST00000594973 ADKP55263 362 aaKnown RBP19■□□□□ 0.63
SHKBP1-205ENST00000594973 BEND6Q5SZJ8 279 aaPredicted RBP19■□□□□ 0.63
SHKBP1-205ENST00000594973 TRIM9Q9C026 710 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 FAM107BQ9H098 131 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 PDE11AQ9HCR9 933 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 RAB21Q9UL25 225 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 ERLIN1O75477 346 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 ASIC1P78348 528 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 SPDYE2Q495Y8 402 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 SYDE2Q5VT97 1194 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 ACER1Q8TDN7 264 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 CDK5RAP3Q96JB5 506 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 PIM2Q9P1W9 311 aa19■□□□□ 0.63
SHKBP1-205ENST00000594973 CNTNAP1P78357 1384 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 GNG11P61952 73 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 TBX2Q13207 712 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 GRB10Q13322 594 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 KCNB1Q14721 858 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 ADSSL1Q8N142 457 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 HAS1Q92839 578 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 NUDT12Q9BQG2 462 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 AMNQ9BXJ7 453 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 RAB34Q9BZG1 259 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 MAGEF1Q9HAY2 307 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 ADD3Q9UEY8 706 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 RHOBTB3O94955 611 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 PMS1P54277 932 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 CXCL9Q07325 125 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 FBXO11Q86XK2 927 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 FAM71BQ8TC56 605 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 SNX29Q8TEQ0 813 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 KIFC2Q96AC6 838 aa18.99■□□□□ 0.63
SHKBP1-205ENST00000594973 A0A087WUV0 522 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-205ENST00000594973 MEIS2O14770 477 aa18.98■□□□□ 0.63
SHKBP1-205ENST00000594973 CCDC172P0C7W6 258 aa18.98■□□□□ 0.63
SHKBP1-205ENST00000594973 PDE4DQ08499 809 aa18.98■□□□□ 0.63
SHKBP1-205ENST00000594973 PNMA5Q96PV4 448 aa18.98■□□□□ 0.63
SHKBP1-205ENST00000594973 CTAGE1Q96RT6 745 aa18.98■□□□□ 0.63
SHKBP1-205ENST00000594973 ANO3Q9BYT9 981 aa18.98■□□□□ 0.63
SHKBP1-205ENST00000594973 COL2A1P02458 1487 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-205ENST00000594973 SHTN1A0MZ66 631 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 MCM6Q14566 821 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms