RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 MOXD2PA6NHM9 499 aa25.18■■□□□ 1.62
HOMER3-206ENST00000594439 NKRFO15226 690 aaKnown RBP eCLIP25.18■■□□□ 1.62
HOMER3-206ENST00000594439 EVI5O60447 810 aa25.18■■□□□ 1.62
HOMER3-206ENST00000594439 PFKFB2O60825 505 aa25.18■■□□□ 1.62
HOMER3-206ENST00000594439 TXNP10599 105 aaKnown RBP25.18■■□□□ 1.62
HOMER3-206ENST00000594439 ATN1P54259 1190 aaPredicted RBP25.18■■□□□ 1.62
HOMER3-206ENST00000594439 SLC39A5Q6ZMH5 540 aa25.18■■□□□ 1.62
HOMER3-206ENST00000594439 TEX2Q8IWB9 1127 aa25.18■■□□□ 1.62
HOMER3-206ENST00000594439 PCSK9Q8NBP7 692 aaKnown RBP25.18■■□□□ 1.62
HOMER3-206ENST00000594439 COPS5Q92905 334 aa25.18■■□□□ 1.62
HOMER3-206ENST00000594439 SMCO2A6NFE2 343 aa25.17■■□□□ 1.62
HOMER3-206ENST00000594439 ASGR1P07306 291 aa25.17■■□□□ 1.62
HOMER3-206ENST00000594439 RBM25P49756 843 aaKnown RBP25.17■■□□□ 1.62
HOMER3-206ENST00000594439 ADCY7P51828 1080 aa25.17■■□□□ 1.62
HOMER3-206ENST00000594439 AKAP17AQ02040 695 aaKnown RBP25.17■■□□□ 1.62
HOMER3-206ENST00000594439 SCRN1Q12765 414 aa25.17■■□□□ 1.62
HOMER3-206ENST00000594439 FSCN1Q16658 493 aaKnown RBP25.17■■□□□ 1.62
HOMER3-206ENST00000594439 ZFP91Q96JP5 570 aaPredicted RBP25.17■■□□□ 1.62
HOMER3-206ENST00000594439 SLKQ9H2G2 1235 aaPredicted RBP25.17■■□□□ 1.62
HOMER3-206ENST00000594439 CPLX1O14810 134 aa25.16■■□□□ 1.62
HOMER3-206ENST00000594439 MRPS9P82933 396 aaKnown RBP25.16■■□□□ 1.62
HOMER3-206ENST00000594439 SNX17Q15036 470 aa25.16■■□□□ 1.62
HOMER3-206ENST00000594439 PRPF38BQ5VTL8 546 aaKnown RBP25.16■■□□□ 1.62
HOMER3-206ENST00000594439 OR6J1Q8NGC5 347 aa25.16■■□□□ 1.62
HOMER3-206ENST00000594439 DDX41Q9UJV9 622 aaKnown RBP25.16■■□□□ 1.62
HOMER3-206ENST00000594439 NR2E3Q9Y5X4 410 aa25.16■■□□□ 1.62
HOMER3-206ENST00000594439 SSRP1Q08945 709 aaKnown RBP25.15■■□□□ 1.62
HOMER3-206ENST00000594439 LY6KQ17RY6 165 aa25.15■■□□□ 1.62
HOMER3-206ENST00000594439 PCNX4Q63HM2 1172 aa25.15■■□□□ 1.62
HOMER3-206ENST00000594439 CPLX2Q6PUV4 134 aaKnown RBP25.15■■□□□ 1.62
HOMER3-206ENST00000594439 C7orf61Q8IZ16 206 aa25.15■■□□□ 1.62
HOMER3-206ENST00000594439 GLT8D2Q9H1C3 349 aa25.15■■□□□ 1.62
HOMER3-206ENST00000594439 PCDHA6Q9UN73 950 aa25.15■■□□□ 1.62
HOMER3-206ENST00000594439 PCDHA8Q9Y5H6 950 aa25.15■■□□□ 1.62
HOMER3-206ENST00000594439 ESYT2A0FGR8 921 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 SPDYE3A6NKU9 549 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 H0YGN5 161 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 LARGE1O95461 756 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 RTP1P59025 263 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 ME3Q16798 604 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 C1orf53Q5VUE5 145 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 XRRA1Q6P2D8 792 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 TRIM22Q8IYM9 498 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 ZMYND12Q9H0C1 365 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 MRVI1Q9Y6F6 885 aa25.14■■□□□ 1.62
HOMER3-206ENST00000594439 MYH7BA7E2Y1 1941 aa25.14■■□□□ 1.61
HOMER3-206ENST00000594439 STAM2O75886 525 aa25.13■■□□□ 1.61
HOMER3-206ENST00000594439 CLK2P49760 499 aaKnown RBP25.13■■□□□ 1.61
HOMER3-206ENST00000594439 ARHGAP1Q07960 439 aa25.13■■□□□ 1.61
HOMER3-206ENST00000594439 CCDC12Q8WUD4 166 aaPredicted RBP25.13■■□□□ 1.61
HOMER3-206ENST00000594439 INPP4AQ96PE3 977 aaPredicted RBP25.13■■□□□ 1.61
HOMER3-206ENST00000594439 STARD7Q9NQZ5 370 aa25.13■■□□□ 1.61
HOMER3-206ENST00000594439 ELP1O95163 1332 aa25.12■■□□□ 1.61
HOMER3-206ENST00000594439 CEP290O15078 2479 aa25.12■■□□□ 1.61
HOMER3-206ENST00000594439 ADAMTS3O15072 1205 aa25.12■■□□□ 1.61
HOMER3-206ENST00000594439 ZEB2O60315 1214 aa25.12■■□□□ 1.61
HOMER3-206ENST00000594439 DEXIO95424 95 aa25.12■■□□□ 1.61
HOMER3-206ENST00000594439 GH1P01241 217 aa25.12■■□□□ 1.61
HOMER3-206ENST00000594439 KCNV1Q6PIU1 500 aa25.12■■□□□ 1.61
HOMER3-206ENST00000594439 CXCL17Q6UXB2 119 aa25.12■■□□□ 1.61
HOMER3-206ENST00000594439 GLT1D1Q96MS3 346 aa25.12■■□□□ 1.61
HOMER3-206ENST00000594439 TMEM260Q9NX78 707 aa25.12■■□□□ 1.61
HOMER3-206ENST00000594439 A6NJR5 290 aa25.11■■□□□ 1.61
HOMER3-206ENST00000594439 FOSP01100 380 aaPredicted RBP25.11■■□□□ 1.61
HOMER3-206ENST00000594439 ICAM3P32942 547 aa25.11■■□□□ 1.61
HOMER3-206ENST00000594439 CPT1AP50416 773 aa25.11■■□□□ 1.61
HOMER3-206ENST00000594439 TRIM60Q495X7 471 aa25.11■■□□□ 1.61
HOMER3-206ENST00000594439 NECAB1Q8N987 351 aa25.11■■□□□ 1.61
HOMER3-206ENST00000594439 PGBD1Q96JS3 809 aa25.11■■□□□ 1.61
HOMER3-206ENST00000594439 C6orf50Q9HD87 102 aa25.11■■□□□ 1.61
HOMER3-206ENST00000594439 RTEL1Q9NZ71 1219 aa25.11■■□□□ 1.61
HOMER3-206ENST00000594439 VPS54Q9P1Q0 977 aa25.11■■□□□ 1.61
HOMER3-206ENST00000594439 ATP11BQ9Y2G3 1177 aa25.11■■□□□ 1.61
HOMER3-206ENST00000594439 CABYRO75952 493 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 CDKL5O76039 1030 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 CTDNEP1O95476 244 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 TGFB3P10600 412 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 SP2Q02086 613 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 SEMA3FQ13275 785 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 AP3B2Q13367 1082 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 GNPTABQ3T906 1256 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 CCDC148Q8NFR7 591 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 GTF3C6Q969F1 213 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 ANO3Q9BYT9 981 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 EHMT1Q9H9B1 1298 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 UPF2Q9HAU5 1272 aaKnown RBP25.1■■□□□ 1.61
HOMER3-206ENST00000594439 SH3GLB2Q9NR46 395 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 STK36Q9NRP7 1315 aa25.1■■□□□ 1.61
HOMER3-206ENST00000594439 SPATA31C2B4DYI2 1134 aa25.09■■□□□ 1.61
HOMER3-206ENST00000594439 UBA1P22314 1058 aaKnown RBP25.09■■□□□ 1.61
HOMER3-206ENST00000594439 AFG1LQ8WV93 481 aa25.09■■□□□ 1.61
HOMER3-206ENST00000594439 EMID1Q96A84 441 aaPredicted RBP25.09■■□□□ 1.61
HOMER3-206ENST00000594439 AIFM3Q96NN9 605 aa25.09■■□□□ 1.61
HOMER3-206ENST00000594439 POLR3EQ9NVU0 708 aa25.09■■□□□ 1.61
HOMER3-206ENST00000594439 FIBPO43427 364 aa25.08■■□□□ 1.61
HOMER3-206ENST00000594439 DTNBO60941 627 aa25.08■■□□□ 1.61
HOMER3-206ENST00000594439 GNA11P29992 359 aa25.08■■□□□ 1.61
HOMER3-206ENST00000594439 PURAQ00577 322 aaKnown RBP25.08■■□□□ 1.61
HOMER3-206ENST00000594439 TLE2Q04725 743 aa25.08■■□□□ 1.61
HOMER3-206ENST00000594439 BRDTQ58F21 947 aaPredicted RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms