RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 SEZ6LQ9BYH1 1024 aa16.05■□□□□ 0.16
APOC1-208ENST00000592535 DDX41Q9UJV9 622 aaKnown RBP16.05■□□□□ 0.16
APOC1-208ENST00000592535 UMODL1Q5DID0 1318 aa16.04■□□□□ 0.16
APOC1-208ENST00000592535 KPNA6O60684 536 aa16.04■□□□□ 0.16
APOC1-208ENST00000592535 RGS20O76081 388 aa16.04■□□□□ 0.16
APOC1-208ENST00000592535 DHX32Q7L7V1 743 aaKnown RBP16.04■□□□□ 0.16
APOC1-208ENST00000592535 VSIG10LQ86VR7 867 aa16.04■□□□□ 0.16
APOC1-208ENST00000592535 MICU3Q86XE3 530 aa16.04■□□□□ 0.16
APOC1-208ENST00000592535 FANCBQ8NB91 859 aa16.04■□□□□ 0.16
APOC1-208ENST00000592535 AFG1LQ8WV93 481 aa16.04■□□□□ 0.16
APOC1-208ENST00000592535 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
APOC1-208ENST00000592535 ALDH8A1Q9H2A2 487 aaPredicted RBP16.04■□□□□ 0.16
APOC1-208ENST00000592535 SEC63Q9UGP8 760 aaKnown RBP16.04■□□□□ 0.16
APOC1-208ENST00000592535 MRVI1Q9Y6F6 885 aa16.04■□□□□ 0.16
APOC1-208ENST00000592535 DOCK5Q9H7D0 1870 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 MMP3P08254 477 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 CSF2RAP15509 400 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 CYP2C18P33260 490 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 KRT32Q14532 448 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 NBPF20Q3BBV1 942 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 TMTC3Q6ZXV5 915 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 CCDC82Q8N4S0 544 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 TMEM199Q8N511 208 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 DEFB123Q8N688 67 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 RNPC3Q96LT9 517 aaKnown RBP16.03■□□□□ 0.16
APOC1-208ENST00000592535 HIPK3Q9H422 1215 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 TRMT13Q9NUP7 481 aaKnown RBP16.03■□□□□ 0.16
APOC1-208ENST00000592535 BRPF3Q9ULD4 1205 aa16.03■□□□□ 0.16
APOC1-208ENST00000592535 hCG_1642624A0A1W2PR95 340 aa16.02■□□□□ 0.16
APOC1-208ENST00000592535 CCND2P30279 289 aa16.02■□□□□ 0.16
APOC1-208ENST00000592535 PPIGQ13427 754 aaKnown RBP eCLIP16.02■□□□□ 0.16
APOC1-208ENST00000592535 FAM47CQ5HY64 1035 aa16.02■□□□□ 0.16
APOC1-208ENST00000592535 APOA5Q6Q788 366 aa16.02■□□□□ 0.16
APOC1-208ENST00000592535 SYNE3Q6ZMZ3 975 aa16.02■□□□□ 0.16
APOC1-208ENST00000592535 C16orf59Q7L2K0 433 aa16.02■□□□□ 0.16
APOC1-208ENST00000592535 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.02■□□□□ 0.164e-7■■■■□ 25.6
APOC1-208ENST00000592535 NOC4LQ9BVI4 516 aaKnown RBP16.02■□□□□ 0.16
APOC1-208ENST00000592535 FRMPD4Q14CM0 1322 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 SCN5AQ14524 2016 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 SORBS3O60504 671 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 ACRP10323 421 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 CYP2C9P11712 490 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 CPA1P15085 419 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 HSPA4P34932 840 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 USP17L6PQ6QN14 398 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 SMARCC2Q8TAQ2 1214 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 GPKOWQ92917 476 aaPredicted RBP eCLIP16.01■□□□□ 0.15
APOC1-208ENST00000592535 KCNB2Q92953 911 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 WNT8AQ9H1J5 351 aa16.01■□□□□ 0.15
APOC1-208ENST00000592535 CNTNAP5Q8WYK1 1306 aa16■□□□□ 0.15
APOC1-208ENST00000592535 TANC1Q9C0D5 1861 aa16■□□□□ 0.15
APOC1-208ENST00000592535 PIK3CDO00329 1044 aa16■□□□□ 0.15
APOC1-208ENST00000592535 MEIS2O14770 477 aa16■□□□□ 0.15
APOC1-208ENST00000592535 CCL23P55773 120 aa16■□□□□ 0.15
APOC1-208ENST00000592535 CHMP4BP1P59074 171 aa16■□□□□ 0.15
APOC1-208ENST00000592535 MRPS9P82933 396 aaKnown RBP16■□□□□ 0.15
APOC1-208ENST00000592535 SP2Q02086 613 aa16■□□□□ 0.15
APOC1-208ENST00000592535 LAMC2Q13753 1193 aa16■□□□□ 0.15
APOC1-208ENST00000592535 TMEM240Q5SV17 173 aa16■□□□□ 0.15
APOC1-208ENST00000592535 NFRKBQ6P4R8 1299 aa16■□□□□ 0.15
APOC1-208ENST00000592535 KCNV1Q6PIU1 500 aa16■□□□□ 0.15
APOC1-208ENST00000592535 DHX37Q8IY37 1157 aaKnown RBP16■□□□□ 0.15
APOC1-208ENST00000592535 KAT2BQ92831 832 aa16■□□□□ 0.15
APOC1-208ENST00000592535 CUL5Q93034 780 aa16■□□□□ 0.15
APOC1-208ENST00000592535 EMID1Q96A84 441 aaPredicted RBP16■□□□□ 0.15
APOC1-208ENST00000592535 MTMR10Q9NXD2 777 aa16■□□□□ 0.15
APOC1-208ENST00000592535 SNX14Q9Y5W7 946 aa16■□□□□ 0.15
APOC1-208ENST00000592535 TRIP12Q14669 1992 aaPredicted RBP16■□□□□ 0.15
APOC1-208ENST00000592535 KLF18A0A0U1RQI7 1052 aa15.99■□□□□ 0.15
APOC1-208ENST00000592535 ZBTB43O43298 467 aa15.99■□□□□ 0.15
APOC1-208ENST00000592535 GGPS1O95749 300 aa15.99■□□□□ 0.15
APOC1-208ENST00000592535 HMGB1P09429 215 aaKnown RBP15.99■□□□□ 0.15
APOC1-208ENST00000592535 SUPT20HL2P0C7V6 817 aa15.99■□□□□ 0.15
APOC1-208ENST00000592535 CASTP20810 708 aaKnown RBP15.99■□□□□ 0.15
APOC1-208ENST00000592535 UBA1P22314 1058 aaKnown RBP15.99■□□□□ 0.15
APOC1-208ENST00000592535 SMAD3P84022 425 aaKnown RBP15.99■□□□□ 0.15
APOC1-208ENST00000592535 PTPN11Q06124 597 aaPredicted RBP15.99■□□□□ 0.15
APOC1-208ENST00000592535 DGKDQ16760 1214 aa15.99■□□□□ 0.15
APOC1-208ENST00000592535 RTN1Q16799 776 aa15.99■□□□□ 0.15
APOC1-208ENST00000592535 CELF3Q5SZQ8 465 aaKnown RBP15.99■□□□□ 0.15
APOC1-208ENST00000592535 MYSM1Q5VVJ2 828 aa15.99■□□□□ 0.15
APOC1-208ENST00000592535 FAM109BQ6ICB4 259 aaPredicted RBP15.99■□□□□ 0.15
APOC1-208ENST00000592535 ZNF365Q70YC5 407 aa15.99■□□□□ 0.15
APOC1-208ENST00000592535 PPTC7Q8NI37 304 aa15.99■□□□□ 0.15
APOC1-208ENST00000592535 JAKMIP1Q96N16 626 aaKnown RBP15.99■□□□□ 0.15
APOC1-208ENST00000592535 IL23AQ9NPF7 189 aa15.99■□□□□ 0.15
APOC1-208ENST00000592535 RBM28Q9NW13 759 aaKnown RBP15.99■□□□□ 0.15
APOC1-208ENST00000592535 GOLGA8AA7E2F4 631 aa15.98■□□□□ 0.15
APOC1-208ENST00000592535 GOLGA8BA8MQT2 603 aa15.98■□□□□ 0.15
APOC1-208ENST00000592535 ZNF286BP0CG31 522 aa15.98■□□□□ 0.15
APOC1-208ENST00000592535 PSRC1Q6PGN9 363 aaPredicted RBP15.98■□□□□ 0.15
APOC1-208ENST00000592535 HEATR3Q7Z4Q2 680 aa15.98■□□□□ 0.15
APOC1-208ENST00000592535 SCLYQ96I15 445 aa15.98■□□□□ 0.15
APOC1-208ENST00000592535 FAM161BQ96MY7 647 aa15.98■□□□□ 0.15
APOC1-208ENST00000592535 SPATA33Q96N06 139 aa15.98■□□□□ 0.15
APOC1-208ENST00000592535 INPP4AQ96PE3 977 aaPredicted RBP15.98■□□□□ 0.15
APOC1-208ENST00000592535 PSTPIP2Q9H939 334 aa15.98■□□□□ 0.15
APOC1-208ENST00000592535 RTEL1Q9NZ71 1219 aa15.98■□□□□ 0.15
APOC1-208ENST00000592535 GBF1Q92538 1859 aa15.97■□□□□ 0.15
APOC1-208ENST00000592535 STAM2O75886 525 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms