RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 GUCD1Q96NT3 240 aa20.14■□□□□ 0.81
CIRBP-235ENST00000591935 SLKQ9H2G2 1235 aaPredicted RBP20.14■□□□□ 0.81
CIRBP-235ENST00000591935 PCDHA1Q9Y5I3 950 aa20.14■□□□□ 0.81
CIRBP-235ENST00000591935 A0A0C4DFX4 3053 aa20.13■□□□□ 0.81
CIRBP-235ENST00000591935 A6NJR5 290 aa20.13■□□□□ 0.81
CIRBP-235ENST00000591935 GHRHRQ02643 423 aa20.13■□□□□ 0.81
CIRBP-235ENST00000591935 LY6KQ17RY6 165 aa20.13■□□□□ 0.81
CIRBP-235ENST00000591935 TMEM240Q5SV17 173 aa20.13■□□□□ 0.81
CIRBP-235ENST00000591935 ALDH8A1Q9H2A2 487 aaPredicted RBP20.13■□□□□ 0.81
CIRBP-235ENST00000591935 MTIF3Q9H2K0 278 aaKnown RBP20.13■□□□□ 0.81
CIRBP-235ENST00000591935 SEMA6BQ9H3T3 888 aa20.13■□□□□ 0.81
CIRBP-235ENST00000591935 LY9Q9HBG7 655 aa20.13■□□□□ 0.81
CIRBP-235ENST00000591935 IL23AQ9NPF7 189 aa20.13■□□□□ 0.81
CIRBP-235ENST00000591935 ANO2Q9NQ90 1003 aa20.13■□□□□ 0.81
CIRBP-235ENST00000591935 PXMP2Q9NR77 195 aa20.13■□□□□ 0.81
CIRBP-235ENST00000591935 SLC27A2O14975 620 aa20.12■□□□□ 0.81
CIRBP-235ENST00000591935 EIF3JO75822 258 aaKnown RBP20.12■□□□□ 0.81
CIRBP-235ENST00000591935 NR3C2P08235 984 aa20.12■□□□□ 0.81
CIRBP-235ENST00000591935 HOXA13P31271 388 aaPredicted RBP20.12■□□□□ 0.81
CIRBP-235ENST00000591935 NBPF20Q3BBV1 942 aa20.12■□□□□ 0.81
CIRBP-235ENST00000591935 CATIPQ7Z7H3 387 aa20.12■□□□□ 0.81
CIRBP-235ENST00000591935 MTA3Q9BTC8 594 aa20.12■□□□□ 0.81
CIRBP-235ENST00000591935 MYL10Q9BUA6 226 aa20.12■□□□□ 0.81
CIRBP-235ENST00000591935 TRMT13Q9NUP7 481 aaKnown RBP20.12■□□□□ 0.81
CIRBP-235ENST00000591935 PRC1O43663 620 aa20.11■□□□□ 0.81
CIRBP-235ENST00000591935 HSPA4P34932 840 aa20.11■□□□□ 0.81
CIRBP-235ENST00000591935 CCL23P55773 120 aa20.11■□□□□ 0.81
CIRBP-235ENST00000591935 PTPN11Q06124 597 aaPredicted RBP20.11■□□□□ 0.81
CIRBP-235ENST00000591935 NECTIN1Q15223 517 aa20.11■□□□□ 0.81
CIRBP-235ENST00000591935 NFRKBQ6P4R8 1299 aa20.11■□□□□ 0.81
CIRBP-235ENST00000591935 ZNF365Q70YC5 407 aa20.11■□□□□ 0.81
CIRBP-235ENST00000591935 RPUSD2Q8IZ73 545 aaKnown RBP20.11■□□□□ 0.81
CIRBP-235ENST00000591935 AFG1LQ8WV93 481 aa20.11■□□□□ 0.81
CIRBP-235ENST00000591935 PIBF1Q8WXW3 757 aa20.11■□□□□ 0.81
CIRBP-235ENST00000591935 NOC4LQ9BVI4 516 aaKnown RBP20.11■□□□□ 0.81
CIRBP-235ENST00000591935 TTYH1Q9H313 450 aaPredicted RBP20.11■□□□□ 0.81
CIRBP-235ENST00000591935 SCN5AQ14524 2016 aa20.1■□□□□ 0.81
CIRBP-235ENST00000591935 TRIP12Q14669 1992 aaPredicted RBP20.1■□□□□ 0.81
CIRBP-235ENST00000591935 PNMA6FA0A0J9YX94 578 aa20.1■□□□□ 0.81
CIRBP-235ENST00000591935 GH1P01241 217 aa20.1■□□□□ 0.81
CIRBP-235ENST00000591935 CYP2C9P11712 490 aa20.1■□□□□ 0.81
CIRBP-235ENST00000591935 ARHGAP1Q07960 439 aa20.1■□□□□ 0.81
CIRBP-235ENST00000591935 CREB3L3Q68CJ9 461 aa20.1■□□□□ 0.81
CIRBP-235ENST00000591935 ZNF654Q8IZM8 581 aa20.1■□□□□ 0.81
CIRBP-235ENST00000591935 ZFP91Q96JP5 570 aaPredicted RBP20.1■□□□□ 0.81
CIRBP-235ENST00000591935 WNT8AQ9H1J5 351 aa20.1■□□□□ 0.81
CIRBP-235ENST00000591935 DDX41Q9UJV9 622 aaKnown RBP20.1■□□□□ 0.81
CIRBP-235ENST00000591935 RGS20O76081 388 aa20.09■□□□□ 0.81
CIRBP-235ENST00000591935 FGBP02675 491 aa20.09■□□□□ 0.81
CIRBP-235ENST00000591935 MYCLP12524 364 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-235ENST00000591935 RASIP1Q5U651 963 aa20.09■□□□□ 0.81
CIRBP-235ENST00000591935 KCNV1Q6PIU1 500 aa20.09■□□□□ 0.81
CIRBP-235ENST00000591935 TMTC2Q8N394 836 aa20.09■□□□□ 0.81
CIRBP-235ENST00000591935 IL31RAQ8NI17 732 aa20.09■□□□□ 0.81
CIRBP-235ENST00000591935 VWCEQ96DN2 955 aa20.09■□□□□ 0.81
CIRBP-235ENST00000591935 MAP3K14Q99558 947 aa20.09■□□□□ 0.81
CIRBP-235ENST00000591935 PDCD2LQ9BRP1 358 aa20.09■□□□□ 0.81
CIRBP-235ENST00000591935 GBF1Q92538 1859 aa20.08■□□□□ 0.81
CIRBP-235ENST00000591935 GRXCR1A8MXD5 290 aa20.08■□□□□ 0.81
CIRBP-235ENST00000591935 SH2B2O14492 632 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-235ENST00000591935 CD2BP2O95400 341 aaKnown RBP20.08■□□□□ 0.81
CIRBP-235ENST00000591935 MMP3P08254 477 aa20.08■□□□□ 0.81
CIRBP-235ENST00000591935 DNAJB2P25686 324 aa20.08■□□□□ 0.81
CIRBP-235ENST00000591935 FAM47CQ5HY64 1035 aa20.08■□□□□ 0.81
CIRBP-235ENST00000591935 FCHSD1Q86WN1 690 aa20.08■□□□□ 0.81
CIRBP-235ENST00000591935 HERVK_113Q902F9 699 aa20.08■□□□□ 0.81
CIRBP-235ENST00000591935 SCLYQ96I15 445 aa20.08■□□□□ 0.81
CIRBP-235ENST00000591935 CDX2Q99626 313 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-235ENST00000591935 GCOM1H8Y6P7 765 aaPredicted RBP20.07■□□□□ 0.8
CIRBP-235ENST00000591935 DDAH1O94760 285 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 PFKMP08237 780 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 POLR2MP0CAP2 368 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 CASTP20810 708 aaKnown RBP20.07■□□□□ 0.8
CIRBP-235ENST00000591935 KIF5BP33176 963 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 MCM5P33992 734 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 CHMP4BP1P59074 171 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 PGM5Q15124 567 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 VSIG10LQ86VR7 867 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 CTCFLQ8NI51 663 aaPredicted RBP20.07■□□□□ 0.8
CIRBP-235ENST00000591935 EMID1Q96A84 441 aaPredicted RBP20.07■□□□□ 0.8
CIRBP-235ENST00000591935 LZTS2Q9BRK4 669 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 LRRC2Q9BYS8 371 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 CXXC1Q9P0U4 656 aaPredicted RBP20.07■□□□□ 0.8
CIRBP-235ENST00000591935 MRVI1Q9Y6F6 885 aa20.07■□□□□ 0.8
CIRBP-235ENST00000591935 CDH23Q9H251 3354 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 PLEKHA8P1O95397 391 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 HSP90AA1P07900 732 aaKnown RBP20.06■□□□□ 0.8
CIRBP-235ENST00000591935 RXRAP19793 462 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 SMARCA1P28370 1054 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 GNAQP50148 359 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 LAMC2Q13753 1193 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 DGKDQ16760 1214 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 RAB11FIP4Q86YS3 637 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 CMTR1Q8N1G2 835 aaKnown RBP20.06■□□□□ 0.8
CIRBP-235ENST00000591935 KAT2BQ92831 832 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 KCNB2Q92953 911 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 TMEM87BQ96K49 555 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 DOCK5Q9H7D0 1870 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 NOD1Q9Y239 953 aa20.06■□□□□ 0.8
CIRBP-235ENST00000591935 PBX2P40425 430 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms