RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 CCZ1BP86790 482 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 CCZ1P86791 482 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-208ENST00000589797 ARHGAP4P98171 946 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 FKBP3Q00688 224 aaKnown RBP16.09■□□□□ 0.17
RETREG3-208ENST00000589797 EAPPQ56P03 285 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-208ENST00000589797 NLRX1Q86UT6 975 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 CHP1Q99653 195 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 RIC1Q4ADV7 1423 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 TCHHQ07283 1943 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 GPR75-ASB3A0A0A6YYF3 556 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 LAD1O00515 517 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 POTEJP0CG39 1038 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 DHTKD1Q96HY7 919 aaPredicted RBP16.09■□□□□ 0.17
RETREG3-208ENST00000589797 OGFRQ9NZT2 677 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 TUBE1Q9UJT0 475 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 ACTN4O43707 911 aaKnown RBP16.09■□□□□ 0.17
RETREG3-208ENST00000589797 NAA35Q5VZE5 725 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 SLFN12Q8IYM2 578 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 MAD2L2Q9UI95 211 aa16.09■□□□□ 0.17
RETREG3-208ENST00000589797 POTEB2H3BUK9 544 aa16.08■□□□□ 0.17
RETREG3-208ENST00000589797 K7ENM7 598 aa16.08■□□□□ 0.17
RETREG3-208ENST00000589797 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.17
RETREG3-208ENST00000589797 CRAMP1Q96RY5 1269 aa16.08■□□□□ 0.17
RETREG3-208ENST00000589797 WDR24Q96S15 920 aa16.08■□□□□ 0.17
RETREG3-208ENST00000589797 NDST4Q9H3R1 872 aa16.08■□□□□ 0.17
RETREG3-208ENST00000589797 SUGCTQ9HAC7 445 aa16.08■□□□□ 0.17
RETREG3-208ENST00000589797 CWC15Q9P013 229 aaKnown RBP16.08■□□□□ 0.17
RETREG3-208ENST00000589797 STXBP3O00186 592 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 FXR1P51114 621 aaKnown RBP eCLIP16.08■□□□□ 0.16
RETREG3-208ENST00000589797 DDR1Q08345 913 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 KRT26Q7Z3Y9 468 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 CCDC25Q86WR0 208 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 NOX5Q96PH1 765 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 ADAMTS1Q9UHI8 967 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 KDM3AQ9Y4C1 1321 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 EHHADHQ08426 723 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 FAM133AQ8N9E0 248 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 HOOK2Q96ED9 719 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 FNBP1Q96RU3 617 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 ANAPC4Q9UJX5 808 aa16.08■□□□□ 0.16
RETREG3-208ENST00000589797 ZEB2O60315 1214 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 MFAP3LO75121 409 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 CAPN2P17655 700 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 ZNF543Q08ER8 600 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 ANKRD40Q6AI12 368 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 RAVER2Q9HCJ3 691 aaKnown RBP16.07■□□□□ 0.16
RETREG3-208ENST00000589797 LTN1O94822 1766 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 AKAP12Q02952 1782 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 RCAN1P53805 252 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 SMTNP53814 917 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 SPP2Q13103 211 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 EZH2Q15910 746 aaKnown RBP16.07■□□□□ 0.16
RETREG3-208ENST00000589797 ZFPM1Q8IX07 1006 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 ANKRD35Q8N283 1001 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 MB21D1Q8N884 522 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 PRMT6Q96LA8 375 aaPredicted RBP16.07■□□□□ 0.16
RETREG3-208ENST00000589797 COL4A3BPQ9Y5P4 624 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 NDUFA10O95299 355 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 NDUFB10O96000 172 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 CTNNA2P26232 953 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 EIF4A3P38919 411 aaKnown RBP16.07■□□□□ 0.16
RETREG3-208ENST00000589797 NCBP1Q09161 790 aaKnown RBP16.07■□□□□ 0.16
RETREG3-208ENST00000589797 C16orf86Q6ZW13 317 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
RETREG3-208ENST00000589797 SH3GLB2Q9NR46 395 aa16.07■□□□□ 0.16
RETREG3-208ENST00000589797 SALL1Q9NSC2 1324 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 WNT7AO00755 349 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 EEF1GP26641 437 aaKnown RBP16.06■□□□□ 0.16
RETREG3-208ENST00000589797 FBXO38Q6PIJ6 1188 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 FBXO28Q9NVF7 368 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 FOSP01100 380 aaPredicted RBP16.06■□□□□ 0.16
RETREG3-208ENST00000589797 CIAPIN1Q6FI81 312 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 AMIGO3Q86WK7 504 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 PPM1KQ8N3J5 372 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 TRIM9Q9C026 710 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 TMEM39BQ9GZU3 492 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 A0A087X0B3 334 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 CCDC172P0C7W6 258 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 PLCB3Q01970 1234 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 MKRN3Q13064 507 aaKnown RBP16.06■□□□□ 0.16
RETREG3-208ENST00000589797 TNFAIP1Q13829 316 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 EXOC3L4Q17RC7 722 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 GLG1Q92896 1179 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 SELENOOQ9BVL4 669 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 JMJD4Q9H9V9 463 aa16.06■□□□□ 0.16
RETREG3-208ENST00000589797 GOLGA8IPA6NC78 632 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 GOLGA8JA6NMD2 632 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 MCM3P25205 808 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 C8orf74Q6P047 294 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 BANK1Q8NDB2 785 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 CCDC51Q96ER9 411 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 CTTNBP2NLQ9P2B4 639 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 DDTLA6NHG4 134 aaPredicted RBP16.05■□□□□ 0.16
RETREG3-208ENST00000589797 DPYDQ12882 1025 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 IFI16Q16666 785 aaKnown RBP16.05■□□□□ 0.16
RETREG3-208ENST00000589797 PHLDB2Q86SQ0 1253 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 SYNCQ9H7C4 482 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 NHEJ1Q9H9Q4 299 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms